Regulon of NagR in Lactobacillus brevis ATCC 367
| Regulator type: | Transcription factor |
| TF locus tag: | LVIS_0540 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Regulog: | NagR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - GntR/Others
- By effector - N-acetylglucosamine-6-phosphate
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -66
Score: 5.3 Sequence: TTTCTGGTCTATACCGATTA
Locus tag: LVIS_0539
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: LVIS_0540
Name: nagR Funciton: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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nagR
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Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
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Position: -58
Score: 5.4 Sequence: AAATCGGTCTAGATCATTTA
Position: -38
Score: 5 Sequence: CAATTGGACTATACCATTAG
Locus tag: LVIS_0689
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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Position: -106
Score: 5.3 Sequence: ATTTCAGTCTATACCAATTT
Locus tag: LVIS_0687
Name: glmS Funciton: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
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glmS
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Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
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Position: -82
Score: 5.1 Sequence: AATGTGGACTAGACCATTTA
Position: -43
Score: 4.5 Sequence: ATAATGGACTAGTCAATAAT
Locus tag: LVIS_1312
Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
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pgi
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Glucose-6-phosphate isomerase (EC 5.3.1.9)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |