Regulon of NihR in Lactobacillus sakei subsp. sakei 23K
| Regulator type: | Transcription factor |
| TF locus tag: | LSA0783 |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Nickel homeostasis |
| Effector: | |
| Regulog: | NihR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - CRP
- By pathway - Nickel homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -148
Score: 5 Sequence: TTGAACATTTGTTAAC
Locus tag: LSA0784
Name: PF09861 Funciton: Conserved hypothetical protein, PF09861 family
Locus tag: LSA0785
Name: PF00731 Funciton: Predicted enzyme, PF00731 family
Locus tag: LSA0786
Name: PF01969 Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: LSA0787
Name: PF01969 Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: LSA0788
Name: LSA0788 Funciton: Predicted glycerol uptake facilitator protein
Locus tag: LSA0789
Name: null Funciton: Hypothetical protein
Locus tag: LSA0790
Name: LSA0790 Funciton: ATP-utilizing enzyme of the PP-loop superfamily |
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PF09861
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Conserved hypothetical protein, PF09861 family
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PF00731
|
Predicted enzyme, PF00731 family
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PF01969
|
Conserved hypothetical protein, PF01969 family
|
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PF01969
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Conserved hypothetical protein, PF01969 family
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LSA0788
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Predicted glycerol uptake facilitator protein
|
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Hypothetical protein
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LSA0790
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ATP-utilizing enzyme of the PP-loop superfamily
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Position: -101
Score: 5 Sequence: GTTAACAAATGTTCAA
Locus tag: LSA0783
Name: nihR Funciton: Predicted transcriptional regulator for nickel homeostasis, Crp family
Locus tag: LSA0782
Name: nikM Funciton: Nickel ECF transporter, substrate-binding protein
Locus tag: LSA0781
Name: nikQ Funciton: Nickel ECF transporter, transmembrane component
Locus tag: LSA0780
Name: nikO Funciton: Nickel ECF transporter, ATP-binding protein |
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nihR
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Predicted transcriptional regulator for nickel homeostasis, Crp family
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nikM
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Nickel ECF transporter, substrate-binding protein
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nikQ
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Nickel ECF transporter, transmembrane component
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nikO
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Nickel ECF transporter, ATP-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |