Regulon of NihR in Lactobacillus fermentum IFO 3956
| Regulator type: | Transcription factor |
| TF locus tag: | LAF_1734 |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Nickel homeostasis |
| Effector: | |
| Regulog: | NihR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - CRP
- By pathway - Nickel homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -127
Score: 4.4 Sequence: TTTTCCTTATGTAACA
Locus tag: LAF_1733
Name: PF09861 Funciton: Conserved hypothetical protein, PF09861 family
Locus tag: LAF_1732
Name: PF00731 Funciton: Predicted enzyme, PF00731 family
Locus tag: LAF_1731
Name: PF01969 Funciton: Conserved hypothetical protein, PF01969 family
Locus tag: LAF_1730
Name: LSA0788 Funciton: Predicted glycerol uptake facilitator protein
Locus tag: LAF_1729
Name: LSA0790 Funciton: ATP-utilizing enzyme of the PP-loop superfamily
Locus tag: LAF_1728
Name: nixA Funciton: High-affinity nickel permease |
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PF09861
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Conserved hypothetical protein, PF09861 family
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PF00731
|
Predicted enzyme, PF00731 family
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PF01969
|
Conserved hypothetical protein, PF01969 family
|
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LSA0788
|
Predicted glycerol uptake facilitator protein
|
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LSA0790
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ATP-utilizing enzyme of the PP-loop superfamily
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nixA
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High-affinity nickel permease
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Position: -129
Score: 4.4 Sequence: TGTTACATAAGGAAAA
Locus tag: LAF_1734
Name: nihR Funciton: Predicted transcriptional regulator for nickel homeostasis, Crp family |
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nihR
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Predicted transcriptional regulator for nickel homeostasis, Crp family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |