Regulon of UxuR in Lactobacillus brevis ATCC 367
| Regulator type: | Transcription factor |
| TF locus tag: | LVIS_0145 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | |
| Regulog: | UxuR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - GntR/Others
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -119
Score: 6.7 Sequence: ATAGCTTATATATCAGTTTT
Locus tag: LVIS_0136
Name: uidB Funciton: Predicted oligogalacturonide transporter
Locus tag: LVIS_0135
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) |
|||
|
uidB
|
Predicted oligogalacturonide transporter
|
||
|
uxaC
|
Uronate isomerase (EC 5.3.1.12)
|
||
|
Position: -259
Score: 6.7 Sequence: AAAACTGATATATAAGCTAT
Locus tag: LVIS_0137
Name: aglX Funciton: Alpha-glucosidase, predicted
Locus tag: LVIS_0138
Name: bglX Funciton: Beta-galactosidase/glucuronidase |
|||
|
aglX
|
Alpha-glucosidase, predicted
|
||
|
bglX
|
Beta-galactosidase/glucuronidase
|
||
|
Position: -86
Score: 6.6 Sequence: AATACTGATATATAAGTTAT
Locus tag: LVIS_0139
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: LVIS_0140
Name: yqhA Funciton: Predicted aldose epimerase
Locus tag: LVIS_0141
Name: pgmX Funciton: Predicted phosphoglycerate mutase
Locus tag: LVIS_0142
Name: pgdH Funciton: Predicted 3-phosphoglycerate dehydrogenase |
|||
|
uxuB
|
D-mannonate oxidoreductase (EC 1.1.1.57)
|
||
|
yqhA
|
Predicted aldose epimerase
|
||
|
pgmX
|
Predicted phosphoglycerate mutase
|
||
|
pgdH
|
Predicted 3-phosphoglycerate dehydrogenase
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |