Regulon of LexA in Oenococcus oeni PSU-1
| Regulator type: | Transcription factor |
| TF locus tag: | OEOE_0970 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -44
Score: 4.8 Sequence: TCGAACAAGCGTTCGT
Locus tag: OEOE_1232
Name: LJ1544 Funciton: hypothetical protein |
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LJ1544
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hypothetical protein
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Position: -76
Score: 4.9 Sequence: ACGAACATGTGTTTGT
Locus tag: OEOE_0970
Name: lexA Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88) |
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lexA
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SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
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Position: -45
Score: 5 Sequence: GCGAACATACTTTCGT
Locus tag: OEOE_1000
Name: dnaE Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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dnaE
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -57
Score: 5.2 Sequence: ACGAACAAATGTTCGT
Locus tag: OEOE_1382
Name: recA Funciton: DNA recombinase A |
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recA
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DNA recombinase A
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Position: -8
Score: 4.8 Sequence: ACGAATGAATGTTCGC
Locus tag: OEOE_1026
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: OEOE_1027
Name: parC Funciton: Topoisomerase IV subunit A (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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parC
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Topoisomerase IV subunit A (EC 5.99.1.-)
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Position: -50
Score: 4.2 Sequence: GGGAACTAATGTTCGC
Locus tag: OEOE_0372
Name: uvrB Funciton: Excinuclease ABC, subunit B
Locus tag: OEOE_0373
Name: null Funciton: Short-chain alcohol dehydrogenase
Locus tag: OEOE_0374
Name: uvrA Funciton: Excinuclease ABC, subunit A |
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uvrB
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Excinuclease ABC, subunit B
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Short-chain alcohol dehydrogenase
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uvrA
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Excinuclease ABC, subunit A
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |