Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Lactobacillus sakei subsp. sakei 23K

Properties
Regulator type: Transcription factor
TF locus tag: LSA1275
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Lactobacillaceae
Statistics of regulated genes:
- Genes 8
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 99 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -35
Score: 4.4
Sequence: ACGAACACTTGTTTTG
Locus tag: LSA1055
Name: uvrC
Funciton: Nuclease subunit of the excinuclease complex
uvrC
Nuclease subunit of the excinuclease complex

Position: -113
Score: 4.7
Sequence: GCGAACATACATTTGG
Locus tag: LSA0976
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: LSA0975
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
parC
Topoisomerase IV subunit A (EC 5.99.1.-)

Position: -70
Score: 4.7
Sequence: ACGAACACTTGTTTGA
Locus tag: LSA1275
Name: lexA
Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
lexA
SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)

Position: -94
Score: 4.9
Sequence: AAGAACGTTTGTTCGA
Locus tag: LSA0487
Name: recA
Funciton: DNA recombinase A
recA
DNA recombinase A

Position: -56
Score: 4.9
Sequence: TAGAACGTTTGTTCGT
Position: -29
Score: 5
Sequence: ACAAACAAATGTTCGG
Locus tag: LSA0683
Name: LJ1544
Funciton: hypothetical protein
LJ1544
hypothetical protein

Position: -190
Score: 4.9
Sequence: GCGAAAATACGTTCGG
Locus tag: LSA0523
Name: uvrB
Funciton: Excinuclease ABC, subunit B
Locus tag: LSA0524
Name: uvrA
Funciton: Excinuclease ABC, subunit A
uvrB
Excinuclease ABC, subunit B
uvrA
Excinuclease ABC, subunit A
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD