Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Lactobacillus rhamnosus GG

Properties
Regulator type: Transcription factor
TF locus tag: LGG_00717
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Lactobacillaceae
Statistics of regulated genes:
- Genes 14
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 99 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -29
Score: 4.9
Sequence: GCGAACATTTGTTTTA
Locus tag: LGG_01358
Name: uvrC
Funciton: Nuclease subunit of the excinuclease complex
uvrC
Nuclease subunit of the excinuclease complex

Position: -179
Score: 4.5
Sequence: ACGAACACACATTCGA
Locus tag: LGG_01419
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: LGG_01420
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
parC
Topoisomerase IV subunit A (EC 5.99.1.-)

Position: -53
Score: 4.5
Sequence: TTGAACACATGTTCGT
Position: -26
Score: 4.9
Sequence: ACAAACAAACGTTCGG
Locus tag: LGG_01676
Name: LJ1544
Funciton: hypothetical protein
LJ1544
hypothetical protein

Position: -60
Score: 4.7
Sequence: GCAAACGTCCGTTCGT
Locus tag: LGG_00717
Name: lexA
Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
lexA
SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)

Position: -27
Score: 5.1
Sequence: GAAAACATATGTTCGA
Locus tag: LGG_01425
Name: xerC
Funciton: Site-specific DNA-tyrosine recombinase, XerC
xerC
Site-specific DNA-tyrosine recombinase, XerC

Position: -40
Score: 5.2
Sequence: GCAAACATACGTTCGT
Locus tag: LGG_01010
Name: umuC
Funciton: UV-damage repair protein
Locus tag: LGG_01009
Name: LVIS_2094
Funciton: Conserved hypothetical protein
umuC
UV-damage repair protein
LVIS_2094
Conserved hypothetical protein

Position: -69
Score: 4.4
Sequence: ACAAACGCGTGTTCGA
Locus tag: LGG_02643
Name: recA
Funciton: DNA recombinase A
recA
DNA recombinase A

Position: -55
Score: 4.3
Sequence: CAGAATGTATGTTCTA
Locus tag: LGG_00328
Name: srmB
Funciton: DinG family ATP-dependent helicase
Locus tag: LGG_00327
Name: lp_0307
Funciton: Conserved hypothetical protein
Locus tag: LGG_00326
Name: lp_0306
Funciton: Conserved hypothetical protein
srmB
DinG family ATP-dependent helicase
lp_0307
Conserved hypothetical protein
lp_0306
Conserved hypothetical protein

Position: -271
Score: 5
Sequence: GCGAAAGTATGTTCGC
Locus tag: LGG_00923
Name: uvrB
Funciton: Excinuclease ABC, subunit B
Locus tag: LGG_00924
Name: uvrA
Funciton: Excinuclease ABC, subunit A
uvrB
Excinuclease ABC, subunit B
uvrA
Excinuclease ABC, subunit A
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD