Regulon of LexA in Lactobacillus reuteri JCM 1112
| Regulator type: | Transcription factor |
| TF locus tag: | LAR_0650 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -132
Score: 4.4 Sequence: ACGAATACATGTTTGG
Locus tag: LAR_0372
Name: uvrB Funciton: Excinuclease ABC, subunit B
Locus tag: LAR_0373
Name: uvrA Funciton: Excinuclease ABC, subunit A |
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uvrB
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Excinuclease ABC, subunit B
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uvrA
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Excinuclease ABC, subunit A
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Position: -71
Score: 5.2 Sequence: GCGAACGTACGTTTGA
Locus tag: LAR_0650
Name: lexA Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88) |
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lexA
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SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
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Position: -89
Score: 4.3 Sequence: ACGAACTTTTGTTCAC
Locus tag: LAR_0509
Name: recA Funciton: DNA recombinase A |
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recA
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DNA recombinase A
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Position: -45
Score: 4.6 Sequence: TCGAACATACGTTTAG
Locus tag: LAR_0752
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: LAR_0753
Name: parC Funciton: Topoisomerase IV subunit A (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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parC
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Topoisomerase IV subunit A (EC 5.99.1.-)
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Position: -67
Score: 4.8 Sequence: AAGAATATATGTTCGT
Locus tag: LAR_0047
Name: addB Funciton: ATP-dependent nuclease, subunit B
Locus tag: LAR_0048
Name: addA Funciton: ATP-dependent nuclease, subunit A |
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addB
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ATP-dependent nuclease, subunit B
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addA
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ATP-dependent nuclease, subunit A
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Position: -59
Score: 4.8 Sequence: TTGAACATATGTTTGA
Locus tag: LAR_1238
Name: umuC Funciton: UV-damage repair protein
Locus tag: LAR_1237
Name: lp_3022 Funciton: Conserved hypothetical protein |
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umuC
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UV-damage repair protein
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lp_3022
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Conserved hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |