Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Lactobacillus plantarum WCFS1

Properties
Regulator type: Transcription factor
TF locus tag: lp_2063
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Lactobacillaceae
Statistics of regulated genes:
- Genes 17
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 99 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -146
Score: 5
Sequence: GCGAAAGTATGTTCGA
Locus tag: lp_0772
Name: uvrB
Funciton: Excinuclease ABC, subunit B
Locus tag: lp_0773
Name: uvrA
Funciton: Excinuclease ABC, subunit A
uvrB
Excinuclease ABC, subunit B
uvrA
Excinuclease ABC, subunit A

Position: -32
Score: 4.3
Sequence: GAGAACGTTTGTTCAG
Locus tag: lp_2694
Name: addB
Funciton: ATP-dependent nuclease, subunit B
Locus tag: lp_2693
Name: addA
Funciton: ATP-dependent nuclease, subunit A
addB
ATP-dependent nuclease, subunit B
addA
ATP-dependent nuclease, subunit A

Position: -81
Score: 5
Sequence: CCGAACATTTGTTTGA
Locus tag: lp_2063
Name: lexA
Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
lexA
SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)

Position: -191
Score: 4.3
Sequence: TAGAACAACTGTTTGG
Locus tag: lp_1899
Name: dnaE
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
dnaE
DNA polymerase III alpha subunit (EC 2.7.7.7)

Position: -90
Score: 4.8
Sequence: ACGAACTTTTGTTCGC
Locus tag: lp_2301
Name: recA
Funciton: DNA recombinase A
recA
DNA recombinase A

Position: -185
Score: 4.9
Sequence: GCGAACGTGTGTTTGC
Locus tag: lp_1840
Name: parE
Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: lp_1839
Name: parC
Funciton: Topoisomerase IV subunit A (EC 5.99.1.-)
parE
Topoisomerase IV subunit B (EC 5.99.1.-)
parC
Topoisomerase IV subunit A (EC 5.99.1.-)

Position: -192
Score: 4.9
Sequence: AAGAACATATGTTCTT
Locus tag: lp_3023
Name: umuC
Funciton: UV-damage repair protein
Locus tag: lp_3022
Name: lp_3022
Funciton: Conserved hypothetical protein
umuC
UV-damage repair protein
lp_3022
Conserved hypothetical protein

Position: -52
Score: 4.6
Sequence: ACGAACAGATGTTTTA
Locus tag: lp_0308
Name: srmB
Funciton: DinG family ATP-dependent helicase
Locus tag: lp_0307
Name: lp_0307
Funciton: Conserved hypothetical protein
Locus tag: lp_0306
Name: lp_0306
Funciton: Conserved hypothetical protein
srmB
DinG family ATP-dependent helicase
lp_0307
Conserved hypothetical protein
lp_0306
Conserved hypothetical protein

Position: -85
Score: 4.8
Sequence: TTGAACGTATGTTCGT
Locus tag: lp_2280
Name: dinP
Funciton: DNA polymerase IV (EC 2.7.7.7)
Locus tag: lp_2279
Name: nrnA
Funciton: 3'-to-5' oligoribonuclease A
Locus tag: lp_2278
Name: rheB
Funciton: Putative ATP-dependent DNA/RNA helicase
dinP
DNA polymerase IV (EC 2.7.7.7)
nrnA
3'-to-5' oligoribonuclease A
rheB
Putative ATP-dependent DNA/RNA helicase
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD