Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of LexA in Lactobacillus casei ATCC 334

Properties
Regulator type: Transcription factor
TF locus tag: LSEI_0730, LSEI_1968
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Lactobacillaceae
Statistics of regulated genes:
- Genes 12
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 99 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -29
Score: 4.9
Sequence: GCGAACATTTGTTTTA
Locus tag: LSEI_1346
Name: uvrC
Funciton: Nuclease subunit of the excinuclease complex
uvrC
Nuclease subunit of the excinuclease complex

Position: -53
Score: 4.3
Sequence: TTGAACACTTGTTCGT
Position: -26
Score: 5
Sequence: ACAAACAAATGTTCGG
Locus tag: LSEI_1631
Name: LJ1544
Funciton: hypothetical protein
LJ1544
hypothetical protein

Position: -53
Score: 4.1
Sequence: TCAAAAGTTTTTTTGT
Locus tag: LSEI_1968
Name: lexA
Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
lexA
SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)

Position: -61
Score: 5
Sequence: GCAAACGTTCGTTCGC
Locus tag: LSEI_0730
Name: lexA
Funciton: SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)
lexA
SOS-response regulator and protease LexA, LexA family (EC 3.4.21.88)

Position: -26
Score: 5
Sequence: GAAAACATACGTTCGA
Locus tag: LSEI_1415
Name: xerC
Funciton: Site-specific DNA-tyrosine recombinase, XerC
xerC
Site-specific DNA-tyrosine recombinase, XerC

Position: -206
Score: 5
Sequence: GCGAAAGTATGTTCGC
Position: -127
Score: 4.2
Sequence: ACGAAATTTTGTTTGG
Locus tag: LSEI_0956
Name: uvrB
Funciton: Excinuclease ABC, subunit B
uvrB
Excinuclease ABC, subunit B

Position: -40
Score: 5.2
Sequence: GCAAACGTATGTTCGT
Locus tag: LSEI_1049
Name: umuC
Funciton: UV-damage repair protein
Locus tag: LSEI_1048
Name: LVIS_2094
Funciton: Conserved hypothetical protein
umuC
UV-damage repair protein
LVIS_2094
Conserved hypothetical protein

Position: -221
Score: 4.8
Sequence: ACAAACGCATGTTCGA
Locus tag: LSEI_2649
Name: recA
Funciton: DNA recombinase A
recA
DNA recombinase A

Position: -55
Score: 4.5
Sequence: GAGAATGTATGTTCTA
Locus tag: LSEI_0288
Name: srmB
Funciton: DinG family ATP-dependent helicase
Locus tag: LSEI_0287
Name: lp_0307
Funciton: Conserved hypothetical protein
Locus tag: LSEI_0286
Name: lp_0306
Funciton: Conserved hypothetical protein
srmB
DinG family ATP-dependent helicase
lp_0307
Conserved hypothetical protein
lp_0306
Conserved hypothetical protein
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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