Regulon of AgaR2 in Pediococcus pentosaceus ATCC 25745
| Regulator type: | Transcription factor |
| TF locus tag: | PEPE_1756 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | N-acetylgalactosamine |
| Regulog: | AgaR2 - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - GntR/Others
- By effector - N-acetylgalactosamine
- By pathway - N-acetylgalactosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -117
Score: 5.6 Sequence: AACTGGTACCAACCAGTT
Locus tag: PEPE_1761
Name: gadF Funciton: Predicted galactosamine disaccharide-specific PTS, EIIA component (EC 2.7.1.69)
Locus tag: PEPE_1760
Name: LJ0015 Funciton: Conserved hypothetical protein
Locus tag: PEPE_1759
Name: gadV Funciton: Predicted galactosamine disaccharide-specific PTS, EIIB component (EC 2.7.1.69)
Locus tag: PEPE_1758
Name: gadW Funciton: Predicted galactosamine disaccharide-specific PTS, EIIC component (EC 2.7.1.69)
Locus tag: PEPE_1757
Name: gadE Funciton: Predicted galactosamine disaccharide-specific PTS, EIID component (EC 2.7.1.69)
Locus tag: PEPE_1756
Name: agaR2 Funciton: N-acetylgalactosamine utilization transcriptional regulator AgaR2, GntR family
Locus tag: PEPE_1755
Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: PEPE_1754
Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) |
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gadF
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Predicted galactosamine disaccharide-specific PTS, EIIA component (EC 2.7.1.69)
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LJ0015
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Conserved hypothetical protein
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gadV
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Predicted galactosamine disaccharide-specific PTS, EIIB component (EC 2.7.1.69)
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gadW
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Predicted galactosamine disaccharide-specific PTS, EIIC component (EC 2.7.1.69)
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gadE
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Predicted galactosamine disaccharide-specific PTS, EIID component (EC 2.7.1.69)
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agaR2
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N-acetylgalactosamine utilization transcriptional regulator AgaR2, GntR family
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agaS
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Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
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agaA
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N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |