Regulon of AgaR2 in Lactobacillus johnsonii NCC 533
| Regulator type: | Transcription factor |
| TF locus tag: | LJ0116 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | N-acetylgalactosamine |
| Regulog: | AgaR2 - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - GntR/Others
- By effector - N-acetylgalactosamine
- By pathway - N-acetylgalactosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -97
Score: 5.8 Sequence: AAGTGGTTGCAACCAGTT
Locus tag: LJ0119
Name: gadV Funciton: Predicted galactosamine disaccharide-specific PTS, EIIB component (EC 2.7.1.69)
Locus tag: LJ0120
Name: gadW Funciton: Predicted galactosamine disaccharide-specific PTS, EIIC component (EC 2.7.1.69)
Locus tag: LJ0121
Name: gadE Funciton: Predicted galactosamine disaccharide-specific PTS, EIID component (EC 2.7.1.69)
Locus tag: LJ0122
Name: gadF Funciton: Predicted galactosamine disaccharide-specific PTS, EIIA component (EC 2.7.1.69) |
|||
|
gadV
|
Predicted galactosamine disaccharide-specific PTS, EIIB component (EC 2.7.1.69)
|
||
|
gadW
|
Predicted galactosamine disaccharide-specific PTS, EIIC component (EC 2.7.1.69)
|
||
|
gadE
|
Predicted galactosamine disaccharide-specific PTS, EIID component (EC 2.7.1.69)
|
||
|
gadF
|
Predicted galactosamine disaccharide-specific PTS, EIIA component (EC 2.7.1.69)
|
||
|
Position: -40
Score: 5.8 Sequence: AGGTGGTACTAACCAGTT
Locus tag: LJ0116
Name: agaR2 Funciton: N-acetylgalactosamine utilization transcriptional regulator AgaR2, GntR family
Locus tag: LJ0117
Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
Locus tag: LJ0118
Name: agaA Funciton: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) |
|||
|
agaR2
|
N-acetylgalactosamine utilization transcriptional regulator AgaR2, GntR family
|
||
|
agaS
|
Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
|
||
|
agaA
|
N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |