Regulon of CtsR in Pediococcus pentosaceus ATCC 25745
| Regulator type: | Transcription factor |
| TF locus tag: | PEPE_1428 |
| Regulator family: | CtsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | CtsR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - CtsR
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -107
Score: 6 Sequence: AGATGTCTGACCAAATTTGACTAT
Locus tag: PEPE_0894
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: PEPE_0895
Name: grpE Funciton: Heat shock protein GrpE
Locus tag: PEPE_0896
Name: dnaK Funciton: Chaperone protein DnaK
Locus tag: PEPE_0897
Name: dnaJ Funciton: Chaperone protein DnaJ |
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hrcA
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Heat shock response transcriptional regulator HrcA, HrcA family
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grpE
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Heat shock protein GrpE
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dnaK
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Chaperone protein DnaK
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dnaJ
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Chaperone protein DnaJ
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Position: -38
Score: -0.6 Sequence: ATAGTCAACATTAGTCAGAGTATA
Locus tag: PEPE_1428
Name: ctsR Funciton: Stress and heat shock response transcriptional regulator CtsR, CtsR family
Locus tag: PEPE_1427
Name: clpC Funciton: ATP-dependent Clp protease ATP-binding subunit ClpC |
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ctsR
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Stress and heat shock response transcriptional regulator CtsR, CtsR family
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clpC
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ATP-dependent Clp protease ATP-binding subunit ClpC
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Position: -128
Score: -0.9 Sequence: TTGGTTAATAAAGGTCAAAAATAC
Locus tag: PEPE_0420
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: PEPE_0421
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Position: -223
Score: -1.5 Sequence: ATGGTCAATATTGGTCAAACATCA
Locus tag: PEPE_0607
Name: clpE Funciton: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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clpE
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ATP-dependent Clp protease, ATP-binding subunit ClpE
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Position: -95
Score: 6.9 Sequence: AAATATTTGACCTTTTTTGACCAA
Locus tag: PEPE_0455
Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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clpP
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ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |