Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NrdR in Lactobacillus plantarum WCFS1

Properties
Regulator type: Transcription factor
TF locus tag: lp_1511
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Regulog: NrdR - Lactobacillaceae
Statistics of regulated genes:
- Genes 8
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 81 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -80
Score: 5.5
Sequence: CTACTATATATAGTAT
Position: -49
Score: 4.4
Sequence: GCACTATCAATTGTAT
Locus tag: lp_2932
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: lp_2931
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Position: -86
Score: 4.6
Sequence: ACCCTAGATGTTGTGT
Position: -54
Score: 4.7
Sequence: TCACCACATGTTGTAT
Locus tag: lp_0694
Name: nrdH
Funciton: Glutaredoxin-like protein NrdH
Locus tag: lp_0693
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: lp_0692
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdH
Glutaredoxin-like protein NrdH
nrdE
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
nrdF
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

Position: -108
Score: 5.7
Sequence: ATACAATATATTGTGT
Position: -78
Score: 4.8
Sequence: ACACTACATGTAGTAG
Locus tag: lp_0259
Name: pnuN
Funciton: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
pnuN
NrdR-regulated deoxyribonucleotide transporter, PnuC-like

Position: -99
Score: 4.4
Sequence: TCACCAGATATTGCAT
Position: -67
Score: 5
Sequence: GTACAATATGTAGTGT
Locus tag: lp_1011
Name: dgk1
Funciton: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
dgk1
Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)

Position: -72
Score: 3.9
Sequence: AAAGTCTATATGGTAT
Position: -40
Score: 5.1
Sequence: ATACAATATATTGTGC
Locus tag: lp_1329
Name: dgk2
Funciton: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
dgk2
Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD