Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of NrdR in Lactobacillus fermentum IFO 3956

Properties
Regulator type: Transcription factor
TF locus tag: LAF_1314
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Regulog: NrdR - Lactobacillaceae
Statistics of regulated genes:
- Genes 9
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 81 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -30
Score: 4.7
Sequence: CCACAACATCTTGTGA
Locus tag: LAF_1675
Name: nrdI
Funciton: Ribonucleotide reduction protein NrdI
Locus tag: LAF_1674
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: LAF_1673
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: LAF_1672
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdI
Ribonucleotide reduction protein NrdI
nrdE
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
nrdF
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdF
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

Position: -109
Score: 5.4
Sequence: CCACCATATCTTGTGT
Position: -78
Score: 4.4
Sequence: GCACGAGATATGGTGG
Locus tag: LAF_0281
Name: nrdH
Funciton: Glutaredoxin-like protein NrdH
Locus tag: LAF_0280
Name: nrdE
Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: LAF_0279
Name: nrdF
Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
nrdH
Glutaredoxin-like protein NrdH
nrdE
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
nrdF
Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

Position: -99
Score: 4.7
Sequence: CCACAAGATCTTGTAA
Position: -68
Score: 5.3
Sequence: AAACTATATGTTGTGT
Locus tag: LAF_1376
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LAF_1375
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD