Regulon of NrdR in Lactobacillus brevis ATCC 367
| Regulator type: | Transcription factor |
| TF locus tag: | LVIS_1039 |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Regulog: | NrdR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NrdR
- By taxonomy - Lactobacillaceae
- By TF family - NrdR
- By effector - Deoxyribonucleotides
- By pathway - Deoxyribonucleotide biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -126
Score: 4.5 Sequence: ACACCATATTTGGTAG
Position: -94
Score: 4.6 Sequence: CTACCAAATATGGTGT
Locus tag: LVIS_0597
Name: nrdH Funciton: Glutaredoxin-like protein NrdH
Locus tag: LVIS_0596
Name: nrdE Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: LVIS_0595
Name: nrdF Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) |
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nrdH
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Glutaredoxin-like protein NrdH
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nrdE
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Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
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nrdF
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Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
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Position: -77
Score: 5.3 Sequence: TAACTATATATTGTAT
Position: -45
Score: 4.6 Sequence: CTACCATATATAGCAT
Locus tag: LVIS_1898
Name: nrdJ Funciton: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Locus tag: LVIS_1897
Name: pduO Funciton: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) |
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nrdJ
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Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
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pduO
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Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
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Position: -100
Score: 4.8 Sequence: CCACGATATATTGTCT
Position: -68
Score: 4.9 Sequence: GTACAATATGTGGTGT
Locus tag: LVIS_1711
Name: dgk1 Funciton: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113) |
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dgk1
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Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
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Position: -82
Score: 5.8 Sequence: CCACAATATATTGTGT
Position: -41
Score: 3.5 Sequence: GTACTAAATATAGAAA
Locus tag: LVIS_0311
Name: pnuN Funciton: NrdR-regulated deoxyribonucleotide transporter, PnuC-like |
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pnuN
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NrdR-regulated deoxyribonucleotide transporter, PnuC-like
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Position: -41
Score: 3.6 Sequence: GTACACTATATCTTGT
Position: -39
Score: 5.7 Sequence: ACACTATATCTTGTAT
Locus tag: LVIS_1520
Name: dgk2 Funciton: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113) |
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dgk2
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Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |