Regulon of HrcA in Lactobacillus rhamnosus GG
| Regulator type: | Transcription factor |
| TF locus tag: | LGG_01606 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 5 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -97
Score: 7.1 Sequence: TTAGCACTCTAACATGACGAGTGCTAA
Locus tag: LGG_02804
Name: hsp Funciton: Small heat shock protein |
|||
|
hsp
|
Small heat shock protein
|
||
|
Position: -54
Score: 7 Sequence: TTAGCACTGTACTTTAAAGAGTGCTAA
Locus tag: LGG_00931
Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
|||
|
clpP
|
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
|
||
|
Position: -56
Score: 6.6 Sequence: TTAGCACTTAGACACAACGAGTGCTAA
Locus tag: LGG_02240
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: LGG_02239
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
|||
|
groS
|
Heat shock protein 60 family co-chaperone GroES
|
||
|
groL
|
Heat shock protein 60 family chaperone GroEL
|
||
|
Position: -42
Score: 7.6 Sequence: TTAGCACTCGTGTAAAACGAGTGCTAA
Locus tag: LGG_01606
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: LGG_01605
Name: grpE Funciton: Heat shock protein GrpE
Locus tag: LGG_01604
Name: dnaK Funciton: Chaperone protein DnaK
Locus tag: LGG_01603
Name: dnaJ Funciton: Chaperone protein DnaJ |
|||
|
hrcA
|
Heat shock response transcriptional regulator HrcA, HrcA family
|
||
|
grpE
|
Heat shock protein GrpE
|
||
|
dnaK
|
Chaperone protein DnaK
|
||
|
dnaJ
|
Chaperone protein DnaJ
|
||
|
Position: -128
Score: 6.2 Sequence: TTAGCACTCTTGCGGTTAGAGTGCTTG
Locus tag: LGG_01823
Name: clpL Funciton: ATP-dependent Clp protease, ATP-binding subunit |
|||
|
clpL
|
ATP-dependent Clp protease, ATP-binding subunit
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |