Regulon of HrcA in Lactobacillus reuteri JCM 1112
| Regulator type: | Transcription factor |
| TF locus tag: | LAR_0677 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -61
Score: 6.5 Sequence: TTAGCACTTGAAGAGTTTGAGTGCTAA
Locus tag: LAR_0342
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: LAR_0343
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Position: -211
Score: 6.9 Sequence: TTAGCATTCATGGCTAAAGAGTGCTAA
Locus tag: LAR_1257
Name: clpL Funciton: ATP-dependent Clp protease, ATP-binding subunit |
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clpL
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ATP-dependent Clp protease, ATP-binding subunit
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Position: -45
Score: 6.5 Sequence: TTAGCACTTGACCCTAATGAGTGCTAA
Locus tag: LAR_0677
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: LAR_0678
Name: grpE Funciton: Heat shock protein GrpE
Locus tag: LAR_0679
Name: dnaK Funciton: Chaperone protein DnaK
Locus tag: LAR_0680
Name: dnaJ Funciton: Chaperone protein DnaJ |
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hrcA
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Heat shock response transcriptional regulator HrcA, HrcA family
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grpE
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Heat shock protein GrpE
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dnaK
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Chaperone protein DnaK
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dnaJ
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Chaperone protein DnaJ
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Position: -47
Score: 5.8 Sequence: TTAGCATATAAGACTAACGAGTGCTAA
Locus tag: LAR_0379
Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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clpP
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ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |