Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of HrcA in Lactobacillus casei ATCC 334

Properties
Regulator type: Transcription factor
TF locus tag: LSEI_1567
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Regulog: HrcA - Lactobacillaceae
Statistics of regulated genes:
- Genes 9
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 69 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -56
Score: 6.7
Sequence: TTAGCACTTAGACATAACGAGTGCTAA
Locus tag: LSEI_2239
Name: groS
Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: LSEI_2238
Name: groL
Funciton: Heat shock protein 60 family chaperone GroEL
groS
Heat shock protein 60 family co-chaperone GroES
groL
Heat shock protein 60 family chaperone GroEL

Position: -97
Score: 6.7
Sequence: TTAGCACTCGACGTTTGCGAGTGCTAA
Locus tag: LSEI_2800
Name: hsp
Funciton: Small heat shock protein
hsp
Small heat shock protein

Position: -51
Score: 6.9
Sequence: TTAGCACTGTACTTTTAAGAGTGCTAA
Locus tag: LSEI_0963
Name: clpP
Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
clpP
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)

Position: -257
Score: 5.9
Sequence: TTAGCACTCTTAGTGGCAGAGTGCTTG
Locus tag: LSEI_1762
Name: clpL
Funciton: ATP-dependent Clp protease, ATP-binding subunit
clpL
ATP-dependent Clp protease, ATP-binding subunit

Position: -42
Score: 7.6
Sequence: TTAGCACTCATATAAAACGAGTGCTAA
Locus tag: LSEI_1567
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: LSEI_1566
Name: grpE
Funciton: Heat shock protein GrpE
Locus tag: LSEI_1565
Name: dnaK
Funciton: Chaperone protein DnaK
Locus tag: LSEI_1563
Name: dnaJ
Funciton: Chaperone protein DnaJ
hrcA
Heat shock response transcriptional regulator HrcA, HrcA family
grpE
Heat shock protein GrpE
dnaK
Chaperone protein DnaK
dnaJ
Chaperone protein DnaJ
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD