Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of HrcA in Lactobacillus acidophilus NCFM

Properties
Regulator type: Transcription factor
TF locus tag: LBA1249
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Regulog: HrcA - Lactobacillaceae
Statistics of regulated genes:
- Genes 10
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 69 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -70
Score: 6.8
Sequence: TTAGCACTTGACTACCAAGAGTGCTAA
Locus tag: LBA0638
Name: clpL
Funciton: ATP-dependent Clp protease, ATP-binding subunit
clpL
ATP-dependent Clp protease, ATP-binding subunit

Position: -93
Score: 6.1
Sequence: TTAGCACTCAGGTTGCATTATTGCTAA
Position: -45
Score: 6.1
Sequence: TTAGCACCTGATAGATGTGAGTGCTAA
Locus tag: LBA1249
Name: hrcA
Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: LBA1248
Name: grpE
Funciton: Heat shock protein GrpE
Locus tag: LBA1247
Name: dnaK
Funciton: Chaperone protein DnaK
Locus tag: LBA1246
Name: dnaJ
Funciton: Chaperone protein DnaJ
hrcA
Heat shock response transcriptional regulator HrcA, HrcA family
grpE
Heat shock protein GrpE
dnaK
Chaperone protein DnaK
dnaJ
Chaperone protein DnaJ

Position: -57
Score: 6.9
Sequence: TTAGCACTCAACGCACTAGAGTGCTAA
Locus tag: LBA1910
Name: clpC
Funciton: ATP-dependent Clp protease ATP-binding subunit ClpA
clpC
ATP-dependent Clp protease ATP-binding subunit ClpA

Position: -126
Score: 7.1
Sequence: TTAGCACTAAATATTAAAGAGTGCTAA
Locus tag: LBA0205
Name: hsp
Funciton: Small heat shock protein
hsp
Small heat shock protein

Position: -59
Score: 6.1
Sequence: TTAGCACAGTACTTGTATGAGTGCTAA
Locus tag: LBA0694
Name: clpP
Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
clpP
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)

Position: -159
Score: 7.6
Sequence: TTAGCACTTTTTTATAAAGAGTGCTAA
Position: -84
Score: 6.8
Sequence: TTAGCACTTAACTAAAAGGAGTGCTAA
Locus tag: LBA0405
Name: groS
Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: LBA0406
Name: groL
Funciton: Heat shock protein 60 family chaperone GroEL
groS
Heat shock protein 60 family co-chaperone GroES
groL
Heat shock protein 60 family chaperone GroEL
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
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