Regulon of ArgR in Lactobacillus fermentum IFO 3956
| Regulator type: | Transcription factor |
| TF locus tag: | LAF_1823, LAF_1258 |
| Regulator family: | ArgR |
| Regulation mode: | repressor, activator |
| Biological process: | Arginine degradation; Arginine biosynthesis |
| Effector: | Arginine |
| Regulog: | ArgR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - ArgR
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine degradation
- By pathway - Arginine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -63
Score: 3.6 Sequence: CTTGCATAATAATTCGTT
Locus tag: LAF_0624
Name: artM Funciton: Arginine ABC transporter, ATP-binding protein |
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artM
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Arginine ABC transporter, ATP-binding protein
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Position: -220
Score: 4.9 Sequence: TGTGTATAAATATTTAGT
Locus tag: LAF_0726
Name: argC Funciton: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Locus tag: LAF_0725
Name: argJ Funciton: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
Locus tag: LAF_0724
Name: argB Funciton: Acetylglutamate kinase (EC 2.7.2.8)
Locus tag: LAF_0723
Name: argD Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) |
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argC
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N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
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argJ
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Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
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argB
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Acetylglutamate kinase (EC 2.7.2.8)
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argD
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Acetylornithine aminotransferase (EC 2.6.1.11)
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Position: -136
Score: 2.3 Sequence: CTTGCATTTTTATTTGAT
Locus tag: LAF_1625
Name: argG Funciton: Argininosuccinate synthase (EC 6.3.4.5)
Locus tag: LAF_1624
Name: argH Funciton: Argininosuccinate lyase (EC 4.3.2.1) |
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argG
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Argininosuccinate synthase (EC 6.3.4.5)
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argH
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Argininosuccinate lyase (EC 4.3.2.1)
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Position: -120
Score: 3.3 Sequence: CGTTCATAAATAACCAAT
Locus tag: LAF_0727
Name: carA Funciton: Carbamoyl-phosphate synthase, small chain (EC 6.3.5.5)
Locus tag: LAF_0728
Name: carB Funciton: Carbamoyl-phosphate synthase, large chain (EC 6.3.5.5) |
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carA
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Carbamoyl-phosphate synthase, small chain (EC 6.3.5.5)
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carB
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Carbamoyl-phosphate synthase, large chain (EC 6.3.5.5)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |