Regulon of DeoR in Lactobacillus reuteri JCM 1112
| Regulator type: | Transcription factor |
| TF locus tag: | LAR_0109 |
| Regulator family: | SorC |
| Regulation mode: | repressor |
| Biological process: | Deoxynucleoside utilization |
| Effector: | Deoxyribose-5-phosphate |
| Regulog: | DeoR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - SorC
- By effector - Deoxyribose-5-phosphate
- By pathway - Deoxynucleoside utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -39
Score: 5.6 Sequence: ATGAAAACGCATTCAA
Locus tag: LAR_0105
Name: deoC Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: LAR_0106
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: LAR_0107
Name: pdp Funciton: Thymidine phosphorylase
Locus tag: LAR_0108
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: LAR_0109
Name: deoR Funciton: Deoxynucleoside utilization transcriptional regulator DeoR, SorC family |
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deoC
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Deoxyribose-phosphate aldolase (EC 4.1.2.4)
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deoB
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Phosphopentomutase (EC 5.4.2.7)
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pdp
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Thymidine phosphorylase
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deoD
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Purine nucleoside phosphorylase (EC 2.4.2.1)
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deoR
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Deoxynucleoside utilization transcriptional regulator DeoR, SorC family
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Position: -251
Score: 5.2 Sequence: ATGACAGCGTTTTCAT
Locus tag: LAR_0095
Name: nupC Funciton: Pyrimidine-nucleoside Na+(H+) cotransporter |
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nupC
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Pyrimidine-nucleoside Na+(H+) cotransporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |