Regulon of DeoR in Lactobacillus fermentum IFO 3956
| Regulator type: | Transcription factor |
| TF locus tag: | LAF_1739 |
| Regulator family: | SorC |
| Regulation mode: | repressor |
| Biological process: | Deoxynucleoside utilization |
| Effector: | Deoxyribose-5-phosphate |
| Regulog: | DeoR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - SorC
- By effector - Deoxyribose-5-phosphate
- By pathway - Deoxynucleoside utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -88
Score: 5.3 Sequence: TTGAATACGCTTTCAT
Locus tag: LAF_1739
Name: deoR Funciton: Deoxynucleoside utilization transcriptional regulator DeoR, SorC family |
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deoR
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Deoxynucleoside utilization transcriptional regulator DeoR, SorC family
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Position: -37
Score: 5.7 Sequence: ATGAAAGCGTATTCAA
Locus tag: LAF_1740
Name: deoC Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: LAF_1741
Name: LAF_1741 Funciton: Conserved hypothetical protein
Locus tag: LAF_1742
Name: rbsK1 Funciton: Ribokinase (EC 2.7.1.15) |
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deoC
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Deoxyribose-phosphate aldolase (EC 4.1.2.4)
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LAF_1741
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Conserved hypothetical protein
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rbsK1
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Ribokinase (EC 2.7.1.15)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |