Regulon of ScrR in Pediococcus pentosaceus ATCC 25745
| Regulator type: | Transcription factor |
| TF locus tag: | PEPE_0520 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose-6-phosphate |
| Regulog: | ScrR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - LacI
- By effector - Sucrose-6-phosphate
- By pathway - Sucrose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -193
Score: 6.5 Sequence: TATGTCAATCGTTTGACATT
Position: -104
Score: 6.1 Sequence: TGTATCAAACGCTTGACATA
Locus tag: PEPE_0518
Name: scrA Funciton: Sucrose-specific PTS system, EIIABC component (EC 2.7.1.69)
Locus tag: PEPE_0517
Name: agaB Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: PEPE_0516
Name: scrK Funciton: Fructokinase (EC 2.7.1.4) |
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scrA
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Sucrose-specific PTS system, EIIABC component (EC 2.7.1.69)
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agaB
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Alpha-galactosidase (EC 3.2.1.22)
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scrK
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Fructokinase (EC 2.7.1.4)
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Position: -171
Score: 6 Sequence: TATGTCAAGCGTTTGATACA
Position: -82
Score: 6.4 Sequence: AATGTCAAACGATTGACATA
Locus tag: PEPE_0519
Name: scrB Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Locus tag: PEPE_0520
Name: scrR Funciton: Sucrose utilization transcriptional regulator ScrR, LacI family
Locus tag: PEPE_0521
Name: agl4 Funciton: Oligo-1,6-glucosidase (EC 3.2.1.10) |
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scrB
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Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
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scrR
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Sucrose utilization transcriptional regulator ScrR, LacI family
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agl4
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Oligo-1,6-glucosidase (EC 3.2.1.10)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |