Regulon of CopR in Lactobacillus fermentum IFO 3956
| Regulator type: | Transcription factor |
| TF locus tag: | LAF_1037 |
| Regulator family: | CopY |
| Regulation mode: | repressor |
| Biological process: | Copper homeostasis |
| Effector: | Copper ion, (Cu2+) |
| Regulog: | CopR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - CopY
- By effector - Copper ion, (Cu2+)
- By pathway - Copper homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -80
Score: 4.9 Sequence: TCGTTGACAATTGTAAACGG
Position: -35
Score: 5.7 Sequence: AGATTTACAGTTGTAAACGA
Locus tag: LAF_0138
Name: copA2 Funciton: Copper-exporting ATPase (EC 3.6.3.4)
Locus tag: LAF_0139
Name: copA3 Funciton: Copper-exporting ATPase (EC 3.6.3.4)
Locus tag: LAF_0140
Name: copA Funciton: Copper-translocating P-type ATPase (EC 3.6.3.4) |
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copA2
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Copper-exporting ATPase (EC 3.6.3.4)
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copA3
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Copper-exporting ATPase (EC 3.6.3.4)
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copA
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Copper-translocating P-type ATPase (EC 3.6.3.4)
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Position: -42
Score: 4.6 Sequence: ACGGGTACACTTGTAAACTG
Locus tag: LAF_1037
Name: copR Funciton: Copper transport transcriptional regulator CopR, CopY family |
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copR
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Copper transport transcriptional regulator CopR, CopY family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |