Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of CcpA in Oenococcus oeni PSU-1

Properties
Regulator type: Transcription factor
TF locus tag: OEOE_0684
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Regulog: CcpA - Lactobacillaceae
Statistics of regulated genes:
- Genes 36
- Operons 22
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 561 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -45
Score: 4.6
Sequence: TTGTAAACGTTTTAAG
Locus tag: OEOE_0146
Name: rbsR
Funciton: Ribose operon transcriptional regulator, LacI family
rbsR
Ribose operon transcriptional regulator, LacI family

Position: -110
Score: 4.7
Sequence: TTGAAAGTGTTTTCAA
Locus tag: OEOE_1611
Name: rpiA
Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
rpiA
Ribose 5-phosphate isomerase A (EC 5.3.1.6)

Position: -19
Score: 4.9
Sequence: TTGAAAACACTTTCAA
Locus tag: OEOE_1612
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: OEOE_1613
Name: rbsD
Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
rbsK
Ribokinase (EC 2.7.1.15)
rbsD
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)

Position: -124
Score: 4.2
Sequence: CAGTAAACGTTTACTA
Position: -92
Score: 4.6
Sequence: TTGTAAACGTTTACTG
Position: -57
Score: 4.9
Sequence: TTGTAAACGTTTACTT
Locus tag: OEOE_0041
Name: malT2
Funciton: Predicted maltose/maltodextrin permease
Locus tag: OEOE_0040
Name: nplT
Funciton: Neopullulanase (EC 3.2.1.135)
malT2
Predicted maltose/maltodextrin permease
nplT
Neopullulanase (EC 3.2.1.135)

Position: -229
Score: 4.2
Sequence: AAGTAAGCGCTTCCAC
Locus tag: OEOE_0527
Name: adhA
Funciton: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1)
adhA
Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1)

Position: -30
Score: 4.9
Sequence: ATGATAACGCTTACAT
Locus tag: OEOE_0249
Name: pmi
Funciton: Mannose-6-phosphate isomerase (EC 5.3.1.8)
pmi
Mannose-6-phosphate isomerase (EC 5.3.1.8)

Position: -218
Score: 4.3
Sequence: ATTTAAACGGTTTTAT
Position: -116
Score: 4.4
Sequence: GTGTAAGCACTTACAA
Locus tag: OEOE_0227
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
araB
Ribulokinase (EC 2.7.1.16)

Position: -96
Score: 4.5
Sequence: TTGAAAACGCTTTATG
Locus tag: OEOE_1342
Name: treP
Funciton: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
Locus tag: OEOE_1341
Name: treP
Funciton: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
Locus tag: OEOE_1340
Name: treA
Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
treP
Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
treP
Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
treA
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)

Position: -186
Score: 4.6
Sequence: ATGAATTCGTTTTCAA
Locus tag: OEOE_1204
Name: fmpA
Funciton: Predicted mannose specific PTS system, IIA component
fmpA
Predicted mannose specific PTS system, IIA component

Position: -237
Score: 4.2
Sequence: TTGACACCGGTTTTAT
Position: -101
Score: 5.1
Sequence: TTGAAAGCGTTTCCAA
Locus tag: OEOE_1090
Name: cad
Funciton: Predicted pheromone precursor lipoprotein, related to Cad
cad
Predicted pheromone precursor lipoprotein, related to Cad

Position: -167
Score: 4.4
Sequence: ATGAAATCGCTACCAT
Position: -115
Score: 4
Sequence: ATGTAAACTCTTTTTT
Locus tag: OEOE_1211
Name: lhv_0924
Funciton: Predicted transcriptional regulator, GntR family
lhv_0924
Predicted transcriptional regulator, GntR family

Position: -70
Score: 4.8
Sequence: ATGAAAGCGTTTTAAG
Locus tag: OEOE_0338
Name: pts20B
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: OEOE_0339
Name: pts20A
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: OEOE_0340
Name: bglA
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: OEOE_0341
Name: bglA
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
pts20B
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
pts20A
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
bglA
6-phospho-beta-glucosidase (EC 3.2.1.86)
bglA
6-phospho-beta-glucosidase (EC 3.2.1.86)

Position: -164
Score: 4.7
Sequence: TTGAAAACAGTTTCAA
Position: -82
Score: 4.5
Sequence: TTGAAAACGATTTTTT
Locus tag: OEOE_0647
Name: ptsI
Funciton: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
ptsI
Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)

Position: -58
Score: 4.8
Sequence: GAGAAAACGTTTTCAT
Locus tag: OEOE_1669
Name: LVIS_0439
Funciton: Sugar phosphate isomerase/epimerase
Locus tag: OEOE_1670
Name: LVIS_0440
Funciton: H+/gluconate symporter related permease
LVIS_0439
Sugar phosphate isomerase/epimerase
LVIS_0440
H+/gluconate symporter related permease

Position: -53
Score: 5.1
Sequence: TTGAAAGCGCTTACAG
Locus tag: OEOE_0327
Name: lplA1
Funciton: Lipoate-protein ligase A
Locus tag: OEOE_0328
Name: pdhA
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: OEOE_0329
Name: pdhB
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: OEOE_0330
Name: pdhC
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: OEOE_0331
Name: pdhD
Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
lplA1
Lipoate-protein ligase A
pdhA
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
pdhB
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
pdhC
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
pdhD
Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component

Position: -122
Score: 4.1
Sequence: TTGAAAACGAAAACTT
Position: -66
Score: 4.5
Sequence: TGAAAAACGTTTTCAA
Locus tag: OEOE_1339
Name: treR
Funciton: Trehalose utilization transcriptional regulator TreR, GntR family
treR
Trehalose utilization transcriptional regulator TreR, GntR family

Position: -59
Score: 4.6
Sequence: ATGTAATCGCTTGCAT
Locus tag: OEOE_0684
Name: ccpA
Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family
ccpA
Carbon catabolism global transcriptional regulator CcpA, LacI family

Position: -147
Score: 4.9
Sequence: AAGTAAACGTTTACAA
Position: -112
Score: 4.4
Sequence: CAGTAAACGTTTACAA
Locus tag: OEOE_0042
Name: malR3
Funciton: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family
malR3
Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family

Position: -118
Score: 3.9
Sequence: TTGGAAGCTATTCCAA
Locus tag: OEOE_0636
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)

Position: -104
Score: 4.3
Sequence: TAGAAACCGCTTATTT
Position: -82
Score: 4.5
Sequence: AATAAAACGTTTACAT
Locus tag: OEOE_0349
Name: glpF2
Funciton: Glycerol uptake facilitator protein
glpF2
Glycerol uptake facilitator protein

Position: -19
Score: 4.9
Sequence: TTGAAAACACTTTCAA
Locus tag: OEOE_1612
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: OEOE_1613
Name: rbsD
Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: OEOE_1614
Name: rbsP
Funciton: Predicted ribose permease
rbsK
Ribokinase (EC 2.7.1.15)
rbsD
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
rbsP
Predicted ribose permease

Position: -93
Score: 4.5
Sequence: ATGGTAGCGATTTCAT
Locus tag: OEOE_1210
Name: bglB
Funciton: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
bglB
Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD