Regulon of CcpA in Lactobacillus plantarum WCFS1
| Regulator type: | Transcription factor |
| TF locus tag: | lp_2256 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-bisphosphate |
| Regulog: | CcpA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 126 |
| - Operons | 56 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - CcpA
- By TF family - LacI
- By effector - HPr, phosphocarrier protein
- By effector - Fructose-1,6-bisphosphate
- By pathway - Carbon catabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -6
Score: 4.3 Sequence: TTGAAAGTGCTTACAG
Locus tag: lp_2095
Name: fruR Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: lp_2096
Name: fruB Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: lp_2097
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
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fruR
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Fructose utilization transcriptional regulator FruR, DeoR family
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fruB
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1-phosphofructokinase (EC 2.7.1.56)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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Position: -61
Score: 4.2 Sequence: TTGATAAGGGTTTCAT
Locus tag: lp_0913
Name: coaA Funciton: Pantothenate kinase (EC 2.7.1.33)
Locus tag: lp_0914
Name: guaA Funciton: GMP synthase (EC 6.3.5.2) |
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coaA
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Pantothenate kinase (EC 2.7.1.33)
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guaA
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GMP synthase (EC 6.3.5.2)
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Position: -77
Score: 4.3 Sequence: ATGTAAGCGTTTGCTG
Locus tag: lp_3589
Name: spxB Funciton: Pyruvate oxidase (EC 1.2.3.3) |
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spxB
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Pyruvate oxidase (EC 1.2.3.3)
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Position: -30
Score: 4.8 Sequence: AAGAAAGCGCTAACAT
Locus tag: lp_0498
Name: rbsP Funciton: Predicted ribose permease
Locus tag: lp_0499
Name: LAF_1741 Funciton: Hypothetical protein
Locus tag: lp_0500
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) |
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rbsP
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Predicted ribose permease
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LAF_1741
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Hypothetical protein
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rbsK
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Ribokinase (EC 2.7.1.15)
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Position: 1
Score: 4 Sequence: TGGTAAGCATTATCAT
Locus tag: lp_0575
Name: manL Funciton: Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
Locus tag: lp_0576
Name: manM Funciton: Mannose-specific PTS system, IIC component (EC 2.7.1.69)
Locus tag: lp_0577
Name: manN Funciton: Mannose-specific PTS system, IID component (EC 2.7.1.69)
Locus tag: lp_0583
Name: manO Funciton: Predicted regulator of the mannose operon, ManO |
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manL
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Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
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manM
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Mannose-specific PTS system, IIC component (EC 2.7.1.69)
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manN
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Mannose-specific PTS system, IID component (EC 2.7.1.69)
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manO
|
Predicted regulator of the mannose operon, ManO
|
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Position: -279
Score: 4.9 Sequence: TTGTAAGCGCATACAT
Position: -189
Score: 3.9 Sequence: TAGTAATCGGTAAAAA
Locus tag: lp_3598
Name: fucR Funciton: L-fucose utilization transcriptional regulator FucR, DeoR family |
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fucR
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L-fucose utilization transcriptional regulator FucR, DeoR family
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Position: -73
Score: 4.5 Sequence: ATGTAAGGGGTTACAT
Locus tag: lp_3627
Name: nplT Funciton: Neopullulanase (EC 3.2.1.135)
Locus tag: lp_3626
Name: melB2 Funciton: Sugar transport protein
Locus tag: lp_3625
Name: malR3 Funciton: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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nplT
|
Neopullulanase (EC 3.2.1.135)
|
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melB2
|
Sugar transport protein
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malR3
|
Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family
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Position: -101
Score: 4 Sequence: CTGTTAACGTTAACAT
Locus tag: lp_0175
Name: malX Funciton: Maltose/maltodextrin ABC transporter, substrate-binding protein
Locus tag: lp_0176
Name: malC Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: lp_0177
Name: malD Funciton: Maltose/maltodextrin ABC transporter, permease protein 2
Locus tag: lp_0178
Name: malA Funciton: Maltodextrose utilization protein MalA |
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malX
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Maltose/maltodextrin ABC transporter, substrate-binding protein
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malC
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Maltose/maltodextrin ABC transporter, permease protein 1
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malD
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Maltose/maltodextrin ABC transporter, permease protein 2
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malA
|
Maltodextrose utilization protein MalA
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Position: -104
Score: 4.6 Sequence: GTGTAAACGTTTACTT
Position: -72
Score: 4.7 Sequence: TTGTAAACGTTTACGT
Locus tag: lp_3533
Name: malT2 Funciton: Predicted maltose/maltodextrin permease
Locus tag: lp_3534
Name: agl3 Funciton: Alpha-glucosidase (EC 3.2.1.20) |
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malT2
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Predicted maltose/maltodextrin permease
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agl3
|
Alpha-glucosidase (EC 3.2.1.20)
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Position: -72
Score: 4.9 Sequence: ATTAAAACGTTTTCAT
Locus tag: lp_3660
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: lp_3659
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: lp_3658
Name: rbsU Funciton: Ribose uptake protein RbsU (TC 2.A.7.5) |
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rbsK
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Ribokinase (EC 2.7.1.15)
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rbsD
|
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
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rbsU
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Ribose uptake protein RbsU (TC 2.A.7.5)
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Position: -46
Score: 5 Sequence: ATGATAGCGTTTTCAT
Locus tag: lp_0370
Name: glpK Funciton: Glycerol kinase (EC 2.7.1.30)
Locus tag: lp_0371
Name: glpD Funciton: Alpha-glycerophosphate oxidase (EC 1.1.3.21)
Locus tag: lp_0372
Name: glpF Funciton: Glycerol uptake facilitator protein |
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glpK
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Glycerol kinase (EC 2.7.1.30)
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glpD
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Alpha-glycerophosphate oxidase (EC 1.1.3.21)
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glpF
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Glycerol uptake facilitator protein
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Position: -78
Score: 5.1 Sequence: TTGTAAGCGCTTTTAA
Locus tag: lp_0439
Name: gmuC Funciton: PTS system, Oligo-beta-mannoside permease IIC component
Locus tag: lp_0440
Name: bglA Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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gmuC
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PTS system, Oligo-beta-mannoside permease IIC component
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bglA
|
6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -32
Score: 4.9 Sequence: ATGTAATCGTTTACAT
Locus tag: lp_2757
Name: nplT Funciton: Neopullulanase (EC 3.2.1.135) |
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nplT
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Neopullulanase (EC 3.2.1.135)
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Position: -77
Score: 3.8 Sequence: GAGGAAGCGCTTTTCA
Locus tag: lp_2502
Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
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pgi
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Glucose-6-phosphate isomerase (EC 5.3.1.9)
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Position: -104
Score: 4.3 Sequence: TAGAAACCGCTTATTT
Position: -82
Score: 4.6 Sequence: AATAAAGCGTTTACAT
Locus tag: lp_3436
Name: glpF2 Funciton: Glycerol uptake facilitator protein |
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glpF2
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Glycerol uptake facilitator protein
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Position: -41
Score: 4.1 Sequence: ACGAAAACGTATACAA
Locus tag: lp_2629
Name: spxB Funciton: Pyruvate oxidase (EC 1.2.3.3) |
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spxB
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Pyruvate oxidase (EC 1.2.3.3)
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Position: -37
Score: 4.8 Sequence: ATGATACCGCTTTCAA
Locus tag: lp_0242
Name: ndk Funciton: Nucleoside diphosphate kinase (EC 2.7.4.6) |
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ndk
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Nucleoside diphosphate kinase (EC 2.7.4.6)
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Position: -63
Score: 4.8 Sequence: TTGAAACCGCTTACCA
Locus tag: lp_0230
Name: mtlA Funciton: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: lp_0231
Name: mtlR Funciton: Mannitol operon antiterminator, BglG family
Locus tag: lp_0232
Name: mtlF Funciton: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Locus tag: lp_0233
Name: mtlD Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
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mtlA
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Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
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mtlR
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Mannitol operon antiterminator, BglG family
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mtlF
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Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
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mtlD
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Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
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Position: -186
Score: 4.5 Sequence: ATGAAAGGGCTTTTAT
Position: -138
Score: 4.3 Sequence: ATGAAAACGGTTATAC
Locus tag: lp_1468
Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein
Locus tag: lp_1469
Name: sufD Funciton: Iron-sulfur cluster assembly protein
Locus tag: lp_1470
Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: lp_1471
Name: sufA Funciton: Fe-S cluster formation protein, NifU-like
Locus tag: lp_1472
Name: sufB Funciton: Fe-S cluster assembly ABC-type transport system, permease component |
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sufC
|
Iron-sulfur cluster assembly ATPase protein
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sufD
|
Iron-sulfur cluster assembly protein
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sufS
|
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
|
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sufA
|
Fe-S cluster formation protein, NifU-like
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sufB
|
Fe-S cluster assembly ABC-type transport system, permease component
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Position: -160
Score: 4.7 Sequence: TTGACACCGCTTACAA
Locus tag: lp_3529
Name: licT Funciton: Beta-glucoside bgl operon transcriptional antiterminator, BglG family |
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licT
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Beta-glucoside bgl operon transcriptional antiterminator, BglG family
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Position: -33
Score: 4.7 Sequence: ATGAAACCGCTTACCA
Locus tag: lp_3596
Name: rhaY Funciton: Predicted L-rhamnose permease RhaY
Locus tag: lp_3595
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: lp_3594
Name: rhaU Funciton: L-rhamnose 1-epimerase (EC 5.1.3.-)
Locus tag: lp_3593
Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: lp_3592
Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) |
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rhaY
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Predicted L-rhamnose permease RhaY
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rhaB
|
Rhamnulokinase (EC 2.7.1.5)
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rhaU
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L-rhamnose 1-epimerase (EC 5.1.3.-)
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rhaA
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L-rhamnose isomerase (EC 5.3.1.14)
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rhaD
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Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
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Position: -118
Score: 4.8 Sequence: AAGAAAGCGCTTTTAT
Locus tag: lp_3240
Name: treP Funciton: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
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treP
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Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
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Position: -29
Score: 4.7 Sequence: ATGAAAACGATAACAA
Locus tag: lp_0262
Name: treR Funciton: Trehalose utilization transcriptional regulator TreR, GntR family
Locus tag: lp_0263
Name: treA Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
Locus tag: lp_0264
Name: treP Funciton: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
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treR
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Trehalose utilization transcriptional regulator TreR, GntR family
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treA
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Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
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treP
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Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
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Position: -68
Score: 4.8 Sequence: AAGAAAACGCTTTCTT
Locus tag: lp_3418
Name: pck Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
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pck
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Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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Position: -147
Score: 4.5 Sequence: GAGAAAACGCTATCAT
Locus tag: lp_0904
Name: licT Funciton: Beta-glucoside bgl operon transcriptional antiterminator, BglG family
Locus tag: lp_0905
Name: bglP Funciton: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
Locus tag: lp_0906
Name: bglH Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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licT
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Beta-glucoside bgl operon transcriptional antiterminator, BglG family
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bglP
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Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
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bglH
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -193
Score: 4.2 Sequence: ATGTAGCCGGTTACAT
Locus tag: lp_0152
Name: lhv_0924 Funciton: Predicted transcriptional regulator, GntR family |
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lhv_0924
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Predicted transcriptional regulator, GntR family
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Position: -137
Score: 4.6 Sequence: ATGTAAAGGCTTACAT
Locus tag: lp_3133
Name: glclP Funciton: Beta-glucosides PTS, EIIBCA (EC 2.7.1.69)
Locus tag: lp_3132
Name: bglA2 Funciton: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: lp_3131
Name: glcT Funciton: Beta-glucoside bgl operon antiterminator, BglG family |
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glclP
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Beta-glucosides PTS, EIIBCA (EC 2.7.1.69)
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bglA2
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Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
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glcT
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Beta-glucoside bgl operon antiterminator, BglG family
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Position: -246
Score: 4.1 Sequence: TTGTAACGGCTTTCAC
Locus tag: lp_3229
Name: glclP Funciton: Beta-glucosides PTS, EIIBCA (EC 2.7.1.69) |
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glclP
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Beta-glucosides PTS, EIIBCA (EC 2.7.1.69)
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Position: -36
Score: 4.7 Sequence: ATGATAGCGATTACAA
Locus tag: lp_3051
Name: dhaT Funciton: 1,3-propanediol dehydrogenase (EC 1.1.1.202) |
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dhaT
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1,3-propanediol dehydrogenase (EC 1.1.1.202)
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Position: -85
Score: 4.6 Sequence: TTGTAAGCGCTTGAAT
Position: -41
Score: 4.5 Sequence: TTGTAAGCGGTTTACA
Locus tag: lp_3054
Name: adhX Funciton: Zn conatining alcohol dehydrogenase |
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adhX
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Zn conatining alcohol dehydrogenase
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Position: -121
Score: 5.2 Sequence: ATGAAAGCGATTTCAA
Position: -51
Score: 4 Sequence: ATGAAAACGGATGAAA
Locus tag: lp_2256
Name: ccpA Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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ccpA
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Carbon catabolism global transcriptional regulator CcpA, LacI family
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Position: -68
Score: 4.7 Sequence: ATGAAAGCGGTTTATT
Locus tag: lp_2781
Name: pts20B Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: lp_2780
Name: pts20A Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: lp_2778
Name: bglA Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: lp_2777
Name: bglA Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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pts20B
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PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
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pts20A
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PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
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bglA
|
6-phospho-beta-glucosidase (EC 3.2.1.86)
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bglA
|
6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -45
Score: 4 Sequence: GATTAACCGTTTACAA
Locus tag: lp_3092
Name: gabD Funciton: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
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gabD
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Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
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Position: -158
Score: 5.2 Sequence: TTGAAATCGCTTTCAT
Locus tag: lp_2258
Name: pepQ Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9) |
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pepQ
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Xaa-Pro dipeptidase (EC 3.4.13.9)
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Position: -65
Score: 5 Sequence: TTGAAAGCGGTTTTAT
Locus tag: lp_1729
Name: malT Funciton: Predicted maltose/maltodextrin permease
Locus tag: lp_1730
Name: mapA Funciton: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
Locus tag: lp_1731
Name: galM Funciton: Aldose 1-epimerase |
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malT
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Predicted maltose/maltodextrin permease
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mapA
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Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
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galM
|
Aldose 1-epimerase
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Position: -135
Score: 4 Sequence: ATGAAAGGGCTTGTAT
Locus tag: lp_1273
Name: ptsH Funciton: Phosphotransferase system, HPr-related protein
Locus tag: lp_1274
Name: ptsI Funciton: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
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ptsH
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Phosphotransferase system, HPr-related protein
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ptsI
|
Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
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Position: -213
Score: 4.3 Sequence: ATGCAAGCGCTTTACA
Position: -59
Score: 4.6 Sequence: GTGTAAGCGGTTTTAT
Locus tag: lp_0187
Name: scrB Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Locus tag: lp_0188
Name: scrR Funciton: Sucrose operon repressor ScrR, LacI family
Locus tag: lp_0189
Name: agl4 Funciton: Oligo-1,6-glucosidase (EC 3.2.1.10) |
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scrB
|
Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
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scrR
|
Sucrose operon repressor ScrR, LacI family
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agl4
|
Oligo-1,6-glucosidase (EC 3.2.1.10)
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Position: -49
Score: 4.6 Sequence: ATGAAAGCGGTAACTT
Locus tag: lp_3489
Name: yghZ Funciton: Predicted oxidoreductase, aryl-alcohol dehydrogenase related |
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yghZ
|
Predicted oxidoreductase, aryl-alcohol dehydrogenase related
|
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Position: -190
Score: 5.1 Sequence: AAGAAAGCGTTTACAA
Locus tag: lp_3566
Name: LVIS_0439 Funciton: Sugar phosphate isomerase/epimerase |
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LVIS_0439
|
Sugar phosphate isomerase/epimerase
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Position: -212
Score: 4.3 Sequence: ATAAAACCGCTTACAC
Position: -157
Score: 4 Sequence: ATGTCAGCGTTTCAAA
Position: -58
Score: 4.1 Sequence: TGTAAAGCGCTTGCAT
Locus tag: lp_0185
Name: scrA Funciton: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) |
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scrA
|
Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
|
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Position: -99
Score: 4.8 Sequence: ATGATAGCGATTTCAA
Locus tag: lp_2968
Name: ydgI Funciton: Putative NAD(P)H nitroreductase |
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ydgI
|
Putative NAD(P)H nitroreductase
|
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Position: -96
Score: 4.4 Sequence: ATGAAAGCGTAGTCAA
Locus tag: lp_0060
Name: yxjF Funciton: Predicted short-chain alcohol dehydrogenase
Locus tag: lp_0061
Name: adc Funciton: Probable acetoacetate decarboxylase
Locus tag: lp_0062
Name: ydgI Funciton: Putative NAD(P)H nitroreductase |
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yxjF
|
Predicted short-chain alcohol dehydrogenase
|
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adc
|
Probable acetoacetate decarboxylase
|
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ydgI
|
Putative NAD(P)H nitroreductase
|
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|
Position: -118
Score: 4.1 Sequence: TTGGAAGGGCTTGCAA
Position: -67
Score: 4.5 Sequence: ATGAAAACGATTACGA
Locus tag: lp_2154
Name: pdhA Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
Locus tag: lp_2153
Name: pdhB Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
Locus tag: lp_2152
Name: pdhC Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
Locus tag: lp_2151
Name: pdhD Funciton: Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component |
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pdhA
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Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component alpha-subunit
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pdhB
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Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E1 component beta-subunit
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pdhC
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Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E2 component
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pdhD
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Dihydrolipoamide dehydrogenase complex (EC 1.8.1.4), E3 component
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Position: -43
Score: 5 Sequence: TTGTAAGCGTTTTTAT
Locus tag: lp_3483
Name: lacL Funciton: Beta-galactosidase large subunit (EC 3.2.1.23)
Locus tag: lp_3484
Name: lacM Funciton: Beta-galactosidase small subunit (EC 3.2.1.23) |
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lacL
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Beta-galactosidase large subunit (EC 3.2.1.23)
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lacM
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Beta-galactosidase small subunit (EC 3.2.1.23)
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Position: -61
Score: 4.4 Sequence: ATGTATGCGCTTTCGT
Locus tag: lp_3657
Name: sorD Funciton: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
Locus tag: lp_3656
Name: srlM Funciton: Sorbitol operon transcription regulator
Locus tag: lp_3655
Name: srlR Funciton: Glucitol operon activator protein
Locus tag: lp_3654
Name: srlA Funciton: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69)
Locus tag: lp_3653
Name: srlE Funciton: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69)
Locus tag: lp_3652
Name: srlB Funciton: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) |
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sorD
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Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
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srlM
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Sorbitol operon transcription regulator
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srlR
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Glucitol operon activator protein
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srlA
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Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69)
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srlE
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Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69)
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srlB
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Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69)
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Position: -130
Score: 3.9 Sequence: ATAACAGCGCTTTTTA
Position: -62
Score: 4.3 Sequence: TAGATAGCGTTTACAG
Locus tag: lp_3623
Name: sorD Funciton: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
Locus tag: lp_3622
Name: srlM Funciton: Sorbitol operon transcription regulator
Locus tag: lp_3621
Name: srlR Funciton: Glucitol operon activator protein
Locus tag: lp_3620
Name: srlA Funciton: Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69)
Locus tag: lp_3619
Name: srlE Funciton: Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69)
Locus tag: lp_3618
Name: srlB Funciton: Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69) |
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sorD
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Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
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srlM
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Sorbitol operon transcription regulator
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srlR
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Glucitol operon activator protein
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srlA
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Glucitol/sorbitol-specific PTS system, IIC component (EC 2.7.1.69)
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srlE
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Glucitol/sorbitol-specific PTS system, IIBC components (EC 2.7.1.69)
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srlB
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Glucitol/sorbitol-specific PTS system, IIA component (EC 2.7.1.69)
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Position: -177
Score: 4.2 Sequence: AATAATACGCTTTCAT
Position: -66
Score: 4.6 Sequence: ATGAAAGCGCTTATCA
Locus tag: lp_3469
Name: lacZ Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: lp_3468
Name: lacS Funciton: Lactose and galactose permease, GPH translocator family |
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lacZ
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Beta-galactosidase (EC 3.2.1.23)
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lacS
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Lactose and galactose permease, GPH translocator family
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Position: -40
Score: 4.4 Sequence: TTGTAAGCACTAACAA
Locus tag: lp_0764
Name: pgm Funciton: Phosphoglucomutase (EC 5.4.2.2) |
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pgm
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Phosphoglucomutase (EC 5.4.2.2)
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Position: -113
Score: 4.4 Sequence: ACGTAAACGTTTACAA
Position: -81
Score: 4.4 Sequence: AAGTAAACGTTTACAC
Locus tag: lp_3531
Name: malR3 Funciton: Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family |
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malR3
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Predicted maltose/maltodextrin utilization transcriptional regulator MalR3, LacI family
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Position: -390
Score: 4.3 Sequence: ATGTAAGCGTCATCAT
Position: -86
Score: 4.9 Sequence: ATAAAAGCGTTTACAT
Locus tag: lp_0849
Name: spxB Funciton: Pyruvate oxidase (EC 1.2.3.3) |
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spxB
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Pyruvate oxidase (EC 1.2.3.3)
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Position: -58
Score: 4.6 Sequence: TTGAAATCGGATTCAT
Locus tag: lp_0168
Name: dhaK Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: lp_0169
Name: dhaL Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: lp_0170
Name: dhaM Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Locus tag: lp_0171
Name: glpF2 Funciton: Glycerol uptake facilitator protein |
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dhaK
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Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
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dhaL
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Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
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dhaM
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Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
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glpF2
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Glycerol uptake facilitator protein
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Position: -187
Score: 4.3 Sequence: TAATAAACGTTTTAAT
Position: -49
Score: 4.4 Sequence: GAGAAAGCGGTTACTA
Locus tag: lp_3644
Name: msmX Funciton: Multiple sugar ABC transporter, permease protein 2
Locus tag: lp_3643
Name: msmY Funciton: Multiple sugar ABC transporter, permease protein 1
Locus tag: lp_3642
Name: msmZ Funciton: Multiple sugar ABC transporter, substrate-binding protein |
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msmX
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Multiple sugar ABC transporter, permease protein 2
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msmY
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Multiple sugar ABC transporter, permease protein 1
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msmZ
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Multiple sugar ABC transporter, substrate-binding protein
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Position: -63
Score: 4.6 Sequence: TTGAAAGGGCTTTCTA
Locus tag: lp_3557
Name: araE Funciton: Arabinose-proton symporter
Locus tag: lp_3556
Name: araB Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: lp_3555
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: lp_3554
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
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araE
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Arabinose-proton symporter
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araB
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Ribulokinase (EC 2.7.1.16)
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araD
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L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
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araA
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L-arabinose isomerase (EC 5.3.1.4)
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Position: -73
Score: 4.2 Sequence: TTGTAAGCGGTACCTT
Locus tag: lp_0193
Name: nplT Funciton: Neopullulanase (EC 3.2.1.135) |
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nplT
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Neopullulanase (EC 3.2.1.135)
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Position: -43
Score: 4.5 Sequence: AGGAAAGCGTTTTCCA
Locus tag: lp_3011
Name: bglB Funciton: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: lp_3010
Name: LBA0884 Funciton: PTS system, IIC component |
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bglB
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Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
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LBA0884
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PTS system, IIC component
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Position: -200
Score: 4.3 Sequence: TTGTAACCGTTTTAGT
Locus tag: lp_2544
Name: hcaD Funciton: NADH peroxidase (EC 1.11.1.1) |
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hcaD
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NADH peroxidase (EC 1.11.1.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |