Regulon of CcpA in Lactobacillus helveticus DPC 4571
| Regulator type: | Transcription factor |
| TF locus tag: | lhv_0457 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-bisphosphate |
| Regulog: | CcpA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 29 |
| - Operons | 17 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - CcpA
- By TF family - LacI
- By effector - HPr, phosphocarrier protein
- By effector - Fructose-1,6-bisphosphate
- By pathway - Carbon catabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -76
Score: 4.3 Sequence: ATGTAAACGTTTGCAC
Locus tag: lhv_0457
Name: ccpA Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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ccpA
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Carbon catabolism global transcriptional regulator CcpA, LacI family
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Position: -34
Score: 4.3 Sequence: TTGAAAACGGTTTCCC
Locus tag: lhv_2002
Name: agl Funciton: Oligo-1,6-glucosidase (EC 3.2.1.10)
Locus tag: lhv_2001
Name: nplT Funciton: Neopullulanase (EC 3.2.1.135) |
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agl
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Oligo-1,6-glucosidase (EC 3.2.1.10)
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nplT
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Neopullulanase (EC 3.2.1.135)
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Position: -130
Score: 4.7 Sequence: GTAAAAGCGCTTACAT
Locus tag: lhv_0152
Name: LBA0143 Funciton: Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase |
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LBA0143
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Maltodextrin glucosidase (EC 3.2.1.20); Alpha-glucosidase, family 31 of glycosyl hydrolase
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Position: -58
Score: 4.3 Sequence: AAGAAAAGGGTTTCAT
Locus tag: lhv_0789
Name: pmi Funciton: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
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pmi
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Mannose-6-phosphate isomerase (EC 5.3.1.8)
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Position: 12
Score: 4.3 Sequence: GAGAAAGCGGATACAA
Locus tag: lhv_1846
Name: fruR Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: lhv_1845
Name: fruB Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: lhv_1844
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
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fruR
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Fructose utilization transcriptional regulator FruR, DeoR family
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fruB
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1-phosphofructokinase (EC 2.7.1.56)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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Position: -42
Score: 4.5 Sequence: ATAAAAGCGGATTCAT
Locus tag: lhv_0480
Name: manL Funciton: Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
Locus tag: lhv_0481
Name: manM Funciton: Mannose-specific PTS system, IIC component (EC 2.7.1.69)
Locus tag: lhv_0482
Name: manN Funciton: Mannose-specific PTS system, IID component (EC 2.7.1.69)
Locus tag: lhv_0483
Name: manO Funciton: Predicted regulator of the mannose operon, ManO |
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manL
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Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
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manM
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Mannose-specific PTS system, IIC component (EC 2.7.1.69)
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manN
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Mannose-specific PTS system, IID component (EC 2.7.1.69)
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manO
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Predicted regulator of the mannose operon, ManO
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Position: -236
Score: 5.2 Sequence: TTGTAAGCGATTTCAA
Position: -149
Score: 4.7 Sequence: TAGGAACCGCTTTCAT
Locus tag: lhv_0924
Name: lhv_0924 Funciton: Predicted transcriptional regulator, GntR family |
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lhv_0924
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Predicted transcriptional regulator, GntR family
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Position: -136
Score: 4.2 Sequence: ATGTAAGTGCTAACAT
Locus tag: lhv_1049
Name: pfk Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: lhv_1050
Name: pyk Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pfk
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6-phosphofructokinase (EC 2.7.1.11)
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pyk
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Pyruvate kinase (EC 2.7.1.40)
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Position: -86
Score: 4.6 Sequence: GTGCAAACGTTTACAT
Locus tag: lhv_0456
Name: pepQ Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9) |
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pepQ
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Xaa-Pro dipeptidase (EC 3.4.13.9)
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Position: -76
Score: 4.4 Sequence: TGTAAACCGCTTTCAA
Locus tag: lhv_2000
Name: mapA Funciton: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
Locus tag: lhv_1999
Name: pgmB Funciton: Beta-phosphoglucomutase (EC 5.4.2.6) |
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mapA
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Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
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pgmB
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Beta-phosphoglucomutase (EC 5.4.2.6)
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Position: -109
Score: 4.4 Sequence: ATGTAAGCTATTACAT
Locus tag: lhv_0686
Name: ptsH Funciton: Phosphotransferase system, HPr-related protein
Locus tag: lhv_0687
Name: ptsI Funciton: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
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ptsH
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Phosphotransferase system, HPr-related protein
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ptsI
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Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
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Position: -178
Score: 4.5 Sequence: ATGAAAGCGCTATATT
Locus tag: lhv_2003
Name: ackB Funciton: Acetate kinase (EC 2.7.2.1) |
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ackB
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Acetate kinase (EC 2.7.2.1)
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Position: -46
Score: 4.4 Sequence: ATAAAAGCTCTTTCAA
Locus tag: lhv_1549
Name: lacL Funciton: Beta-galactosidase large subunit (EC 3.2.1.23)
Locus tag: lhv_1550
Name: lacM Funciton: Beta-galactosidase small subunit (EC 3.2.1.23) |
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lacL
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Beta-galactosidase large subunit (EC 3.2.1.23)
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lacM
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Beta-galactosidase small subunit (EC 3.2.1.23)
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Position: -41
Score: 4.6 Sequence: GTGTAAGCGATTTCTA
Locus tag: lhv_1543
Name: lacS Funciton: Lactose and galactose permease, GPH translocator family |
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lacS
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Lactose and galactose permease, GPH translocator family
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Position: -14
Score: 4 Sequence: TAGGAAGCGGATTTAT
Locus tag: lhv_0795
Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
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pgi
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Glucose-6-phosphate isomerase (EC 5.3.1.9)
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Position: -37
Score: 4.8 Sequence: TTGAAAACGATTACAG
Locus tag: lhv_1501
Name: galK Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: lhv_1500
Name: galT Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Locus tag: lhv_1499
Name: galM Funciton: Aldose 1-epimerase (EC 5.1.3.3) |
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galK
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Galactokinase (EC 2.7.1.6)
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galT
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Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
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galM
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Aldose 1-epimerase (EC 5.1.3.3)
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Position: -34
Score: 4 Sequence: CTGAAAGCACTTACAG
Locus tag: lhv_0941
Name: bglB Funciton: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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bglB
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Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |