Regulon of XylR in Pediococcus pentosaceus ATCC 25745
| Regulator type: | Transcription factor |
| TF locus tag: | PEPE_0186 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Regulog: | XylR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - XylR
- By TF family - ROK
- By effector - Xylose
- By pathway - Xylose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -66
Score: 5.1 Sequence: GTTTGTAAATAGAACTAACAAAC
Locus tag: PEPE_0185
Name: xynT Funciton: Xyloside transporter XynT
Locus tag: PEPE_0186
Name: xylR Funciton: Xylose repressor XylR, ROK family
Locus tag: PEPE_0187
Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: PEPE_0188
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17) |
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xynT
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Xyloside transporter XynT
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xylR
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Xylose repressor XylR, ROK family
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xylA
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Xylose isomerase (EC 5.3.1.5)
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xylB
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Xylulose kinase (EC 2.7.1.17)
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Position: -182
Score: 5.1 Sequence: GTTTGTTAGTTCTATTTACAAAC
Locus tag: PEPE_0184
Name: xylS Funciton: Alpha-xylosidase (EC 3.2.1.-) |
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xylS
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Alpha-xylosidase (EC 3.2.1.-)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |