Regulon of RhaR in Roseiflexus castenholzii DSM 13941
| Regulator type: | Transcription factor |
| TF locus tag: | Rcas_3457 |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Regulog: | RhaR - Chloroflexia |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Chloroflexi
- By TF family - DeoR
- By effector - Rhamnose
- By pathway - Rhamnose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -78
Score: 7 Sequence: TCGAAA-(4)-CCGAAA
Position: -68
Score: 6.3 Sequence: CCGAAA-(4)-TTGACA
Position: -58
Score: 6.9 Sequence: TTGACA-(4)-TCGAAA
Locus tag: Rcas_3457
Name: rhaR Funciton: Transcriptional regulator of rhamnose utilization, DeoR family
Locus tag: Rcas_3456
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: Rcas_3455
Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: Rcas_3454
Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
Locus tag: Rcas_3453
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) |
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rhaR
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Transcriptional regulator of rhamnose utilization, DeoR family
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rhaM
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L-rhamnose mutarotase
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rhaA
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L-rhamnose isomerase (EC 5.3.1.14)
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rhaEW
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Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22)
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rhaB
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Rhamnulokinase (EC 2.7.1.5)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |