Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Roseiflexus sp. RS-1

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Chloroflexia
Under regulation:
- Genes 14
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -221
Score: 60.4
Sequence: TACCGTTCCGTAGGG...
Locus tag: RoseRS_1028
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: RoseRS_1027
Name: null
Funciton: hypothetical protein
tenA
Thiaminase II (EC 3.5.99.2)
hypothetical protein

Position: -218
Score: 59.6
Sequence: AGGGGAGCCAGGAGA...
Locus tag: RoseRS_0668
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: RoseRS_0669
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: RoseRS_0670
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: RoseRS_0671
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
COG0011
Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
thiX
Hydroxymethylpyrimidine ABC transporter, transmembrane component
thiY
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
thiZ
Hydroxymethylpyrimidine ABC transporter, ATPase component

Position: -183
Score: 68.2
Sequence: ACGGCGCCACTGGGG...
Locus tag: RoseRS_1927
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: RoseRS_1926
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: RoseRS_1925
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: RoseRS_1924
Name: ecfA
Funciton: ATPase component of general energizing module of ECF transporters
Locus tag: RoseRS_1923
Name: ecfA
Funciton: ATPase component of general energizing module of ECF transporters
Locus tag: RoseRS_1922
Name: ecfT
Funciton: Transmembrane component of general energizing module of ECF transporters
Locus tag: RoseRS_1921
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiW
Substrate-specific component ThiW of predicted thiazole ECF transporter
ecfA
ATPase component of general energizing module of ECF transporters
ecfA
ATPase component of general energizing module of ECF transporters
ecfT
Transmembrane component of general energizing module of ECF transporters
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)

Position: -175
Score: 73.8
Sequence: TAAGCGTGTATGAGG...
Locus tag: RoseRS_2771
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
cytX
Predicted hydroxymethylpyrimidine transporter CytX
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