Regulon of TPP in Chloroflexus sp. Y-400-fl
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Chloroflexia |
| Under regulation: | |
| - Genes | 11 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Chloroflexi
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -193
Score: 56.2 Sequence: GTGTTCCGTAGGGGC...
Locus tag: Chy400_0862
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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tenA
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Thiaminase II (EC 3.5.99.2)
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Position: -197
Score: 67.7 Sequence: TACGCGCTGCCAGGG...
Locus tag: Chy400_0456
Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: Chy400_0455
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Chy400_0454
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Chy400_0453
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component |
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COG0011
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Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
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thiX
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Hydroxymethylpyrimidine ABC transporter, transmembrane component
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thiY
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Hydroxymethylpyrimidine ABC transporter, substrate-binding component
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thiZ
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Hydroxymethylpyrimidine ABC transporter, ATPase component
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Position: -228
Score: 61.8 Sequence: ACTAATAAGCCAGGG...
Locus tag: Chy400_0401
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Chy400_0400
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Chy400_0399
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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Position: -202
Score: 59.2 Sequence: ACAGCGTGTATGAGG...
Locus tag: Chy400_0859
Name: cytX Funciton: Predicted hydroxymethylpyrimidine transporter CytX
Locus tag: Chy400_0858
Name: thiW-ecfAA Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter/ ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
Locus tag: Chy400_0857
Name: ecfT Funciton: Transmembrane component of general energizing module of ECF transporters |
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cytX
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Predicted hydroxymethylpyrimidine transporter CytX
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thiW-ecfAA
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Substrate-specific component ThiW of predicted thiazole ECF transporter/ ATPase component of general energizing module of ECF transporters / ATPase component of general energizing module of ECF transporters
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ecfT
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Transmembrane component of general energizing module of ECF transporters
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |