Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of T-box(Trp) in Lactobacillus casei ATCC 334

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Trp-tRNA
Regulog: T-box(Trp) - Lactobacillaceae
Under regulation:
- Genes 7
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -468
Score: 97.1
Sequence: GAACAAACCGATGAT...
Locus tag: LSEI_0078
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: LSEI_0077
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
Locus tag: LSEI_0076
Name: trpF
Funciton: Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: LSEI_0075
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: LSEI_0074
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpD
Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
trpC
Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
trpF
Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
trpB
Tryptophan synthase beta chain (EC 4.2.1.20)
trpA
Tryptophan synthase alpha chain (EC 4.2.1.20)

Position: -350
Score: 72.8
Sequence: TATTCACACAAACGA...
Locus tag: LSEI_2624
Name: trpS
Funciton: Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2
trpS
Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## type 2

Position: -416
Score: 89.9
Sequence: ATGCAAACCTTTGAA...
Locus tag: LSEI_2797
Name: oppA
Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
oppA
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD