Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of T-box(Met) in Lactobacillus fermentum IFO 3956

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Met-tRNA
Regulog: T-box(Met) - Lactobacillaceae
Under regulation:
- Genes 13
- Operons 6
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -284
Score: 72.8
Sequence: GAAAAGTTAGAAAGA...
Locus tag: LAF_0793
Name: metQ2
Funciton: Methionine ABC transporter substrate-binding protein
Locus tag: LAF_0794
Name: msrA
Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
metQ2
Methionine ABC transporter substrate-binding protein
msrA
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)

Position: -280
Score: 76.1
Sequence: TGTTCACGTTGATGA...
Locus tag: LAF_0814
Name: metB
Funciton: Cystathionine gamma-lyase (EC 4.4.1.1)
Locus tag: LAF_0815
Name: metI
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
metB
Cystathionine gamma-lyase (EC 4.4.1.1)
metI
Cystathionine gamma-synthase (EC 2.5.1.48)

Position: -317
Score: 90.3
Sequence: AAAACATATCGAAAA...
Locus tag: LAF_0053
Name: metQ
Funciton: Methionine ABC transporter substrate-binding protein
Locus tag: LAF_0054
Name: metN
Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: LAF_0055
Name: metP
Funciton: Methionine ABC transporter permease protein
Locus tag: LAF_0056
Name: hmrB
Funciton: N-acyl-L-amino acid amidohydrolase
metQ
Methionine ABC transporter substrate-binding protein
metN
Methionine ABC transporter ATP-binding protein
metP
Methionine ABC transporter permease protein
hmrB
N-acyl-L-amino acid amidohydrolase

Position: -328
Score: 81.7
Sequence: ATAAGTTGCTGAGAA...
Locus tag: LAF_0302
Name: metE2
Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
metE2
Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)

Position: -274
Score: 80.5
Sequence: ATAAATTTCGTTGAT...
Locus tag: LAF_0826
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Locus tag: LAF_0825
Name: hom
Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)
hom
Homoserine dehydrogenase (EC 1.1.1.3)

Position: -316
Score: 72.1
Sequence: AGAAACAGCTGAGAA...
Locus tag: LAF_1601
Name: metE2
Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: LAF_1600
Name: rhc
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
metE2
Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
rhc
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD