Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of Cobalamin in Roseiflexus castenholzii DSM 13941

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Chloroflexia
Under regulation:
- Genes 23
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -325
Score: 64.2
Sequence: CAAGTGAATACCATC...
Locus tag: Rcas_2247
Name: null
Funciton: hypothetical protein
Locus tag: Rcas_2248
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Rcas_2249
Name: cbiW
Funciton: ferredoxin-like protein
Locus tag: Rcas_2250
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Rcas_2251
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATP-binding component BtuD
hypothetical protein
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
cbiW
ferredoxin-like protein
btuC
Vitamin B12 ABC transporter, permease component BtuC
btuD
Vitamin B12 ABC transporter, ATP-binding component BtuD

Position: -424
Score: 61.3
Sequence: TCAATCCAACGACCG...
Locus tag: Rcas_0649
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Rcas_0648
Name: cobN
Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Rcas_0647
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Rcas_0646
Name: cbiO
Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
Locus tag: Rcas_0645
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Rcas_0644
Name: cbiX
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Locus tag: Rcas_0643
Name: wrbA
Funciton: multimeric flavodoxin WrbA-like protein
Locus tag: Rcas_0642
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Rcas_0641
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: Rcas_0640
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Rcas_0639
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Rcas_0638
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Rcas_0637
Name: cbiGH
Funciton: Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
Locus tag: Rcas_0636
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Rcas_0635
Name: cbiA
Funciton: Cobyrinic acid A,C-diamide synthase
Locus tag: Rcas_0634
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Rcas_0633
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Rcas_0632
Name: cbiP
Funciton: Cobyric acid synthase
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
cobN
CobN component of cobalt chelatase involved in B12 biosynthesis
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
cbiO
ATPase component CbiO of energizing module of cobalt ECF transporter
cbiB
Adenosylcobinamide-phosphate synthase
cbiX
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
wrbA
multimeric flavodoxin WrbA-like protein
cbiC
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiD
Cobalt-precorrin-6 synthase, anaerobic
cbiET
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiF
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
cbiGH
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase
cobA
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
cbiA
Cobyrinic acid A,C-diamide synthase
cobU
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
cobD
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
cbiP
Cobyric acid synthase
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