Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PyrR in Lactobacillus sakei subsp. sakei 23K

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Regulog: PyrR - Lactobacillaceae
Under regulation:
- Genes 13
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -122
Score: 56.3
Sequence: TAATTCCTTTTAAGT...
Locus tag: LSA1211
Name: codB
Funciton: Cytosine/purine/uracil/thiamine/allantoin permease family protein
Locus tag: LSA1210
Name: codB
Funciton: Cytosine/purine/uracil/thiamine/allantoin permease family protein
codB
Cytosine/purine/uracil/thiamine/allantoin permease family protein
codB
Cytosine/purine/uracil/thiamine/allantoin permease family protein

Position: -153
Score: 19.9
Sequence: TATATTCTATGGGCG...
Locus tag: LSA1629
Name: pyrG
Funciton: CTP synthase (EC 6.3.4.2)
pyrG
CTP synthase (EC 6.3.4.2)

Position: -169
Score: 41
Sequence: GAACCGTTTAATTGT...
Locus tag: LSA0951
Name: pyrP
Funciton: Xanthine/uracil permease
Locus tag: LSA0952
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LSA0953
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LSA0954
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LSA0955
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: LSA0956
Name: pyrK
Funciton: Dihydroorotate oxidase, electron transfer subunit
Locus tag: LSA0957
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LSA0958
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LSA0959
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrP
Xanthine/uracil permease
pyrB
Aspartate carbamoyltransferase (EC 2.1.3.2)
pyrC
Dihydroorotase (EC 3.5.2.3)
carA
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
carB
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
pyrK
Dihydroorotate oxidase, electron transfer subunit
pyrD
Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
pyrF
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrE
Orotate phosphoribosyltransferase (EC 2.4.2.10)

Position: -141
Score: 63.7
Sequence: AAACCTTTAATTTCA...
Locus tag: LSA0950
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
pyrR
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD