Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of PyrR in Lactobacillus reuteri JCM 1112

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Regulog: PyrR - Lactobacillaceae
Under regulation:
- Genes 10
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -140
Score: 47.8
Sequence: GTTCTTTTAATGTAG...
Locus tag: LAR_0247
Name: codB
Funciton: Cytosine/purine/uracil/thiamine/allantoin permease family protein
Locus tag: LAR_0248
Name: codA
Funciton: Cytosine deaminase (EC 3.5.4.1)
codB
Cytosine/purine/uracil/thiamine/allantoin permease family protein
codA
Cytosine deaminase (EC 3.5.4.1)

Position: -292
Score: 59.6
Sequence: ATACCTTTAACTTAG...
Position: -148
Score: 40
Sequence: CGACCATTTAATTGT...
Locus tag: LAR_0117
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: LAR_0118
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: LAR_0119
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: LAR_0120
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: LAR_0121
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrB
Aspartate carbamoyltransferase (EC 2.1.3.2)
pyrC
Dihydroorotase (EC 3.5.2.3)
pyrD
Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
pyrF
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrE
Orotate phosphoribosyltransferase (EC 2.4.2.10)

Position: -198
Score: 49.9
Sequence: ATTATCCTTTAATTT...
Locus tag: LAR_0081
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: LAR_0080
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
carA
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
carB
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)

Position: -94
Score: 57.8
Sequence: AGACCTTTAATCGGA...
Locus tag: LAR_0450
Name: pyrP
Funciton: Xanthine/uracil permease
pyrP
Xanthine/uracil permease
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