Regulon of TPP in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Lactobacillaceae |
| Under regulation: | |
| - Genes | 23 |
| - Operons | 8 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -176
Score: 79.2 Sequence: CTGTCCACTAGGGGT...
Locus tag: LEUM_1546
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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tenA
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Thiaminase II (EC 3.5.99.2)
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Position: -234
Score: 60 Sequence: ATAAATATCTGGGGT...
Locus tag: LEUM_0485
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LEUM_0486
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LEUM_0487
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -409
Score: 65.9 Sequence: ACACCAAAATCTGGG...
Locus tag: LEUM_0769
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_0768
Name: null Funciton: hypothetical protein
Locus tag: LEUM_0767
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_0766
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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hypothetical protein
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
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Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Position: -223
Score: 64.2 Sequence: ATATGTATGTCTGGG...
Locus tag: LEUM_1159
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiE
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Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -213
Score: 60.5 Sequence: AATATTTTATCTGGG...
Locus tag: LEUM_1545
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_1544
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_1543
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
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Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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Position: -349
Score: 65.3 Sequence: GCTTGTGCTAGGGGC...
Position: -177
Score: 79.9 Sequence: ATAATCACTAGGGGC...
Locus tag: LEUM_0933
Name: null Funciton: Xanthine/uracil permease
Locus tag: LEUM_0934
Name: null Funciton: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligse II
Locus tag: LEUM_0935
Name: null Funciton: Acyl-CoA reductase (LuxC)
Locus tag: LEUM_0936
Name: null Funciton: 3-oxoacyl-acyl carrier protein reductase
Locus tag: LEUM_0937
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: LEUM_0938
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
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Xanthine/uracil permease
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Acyl-CoA synthetase (AMP-forming)/AMP-acid ligse II
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Acyl-CoA reductase (LuxC)
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3-oxoacyl-acyl carrier protein reductase
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thiW
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Substrate-specific component ThiW of predicted thiazole ECF transporter
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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Position: -176
Score: 63 Sequence: TAAATAACTAGGGGC...
Locus tag: LEUM_0981
Name: null Funciton: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase
Locus tag: LEUM_0982
Name: null Funciton: hypothetical protein |
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Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase
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hypothetical protein
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Position: -218
Score: 64.8 Sequence: ATTAACATACTAGGG...
Locus tag: LEUM_1455
Name: null Funciton: Nucleoside 2-deoxyribosyltransferase
Locus tag: LEUM_1454
Name: null Funciton: Thymidylate synthase
Locus tag: LEUM_1453
Name: null Funciton: SAM-dependent methyltransferase |
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Nucleoside 2-deoxyribosyltransferase
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Thymidylate synthase
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SAM-dependent methyltransferase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |