Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Lactobacillaceae
Under regulation:
- Genes 23
- Operons 8
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -176
Score: 79.2
Sequence: CTGTCCACTAGGGGT...
Locus tag: LEUM_1546
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
tenA
Thiaminase II (EC 3.5.99.2)

Position: -234
Score: 60
Sequence: ATAAATATCTGGGGT...
Locus tag: LEUM_0485
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LEUM_0486
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LEUM_0487
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Position: -409
Score: 65.9
Sequence: ACACCAAAATCTGGG...
Locus tag: LEUM_0769
Name: ykoE
Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_0768
Name: null
Funciton: hypothetical protein
Locus tag: LEUM_0767
Name: ykoD
Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_0766
Name: ykoC
Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
hypothetical protein
ykoD
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoC
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine

Position: -223
Score: 64.2
Sequence: ATATGTATGTCTGGG...
Locus tag: LEUM_1159
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)

Position: -213
Score: 60.5
Sequence: AATATTTTATCTGGG...
Locus tag: LEUM_1545
Name: ykoE
Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_1544
Name: ykoD
Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LEUM_1543
Name: ykoC
Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoD
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoC
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine

Position: -349
Score: 65.3
Sequence: GCTTGTGCTAGGGGC...
Position: -177
Score: 79.9
Sequence: ATAATCACTAGGGGC...
Locus tag: LEUM_0933
Name: null
Funciton: Xanthine/uracil permease
Locus tag: LEUM_0934
Name: null
Funciton: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligse II
Locus tag: LEUM_0935
Name: null
Funciton: Acyl-CoA reductase (LuxC)
Locus tag: LEUM_0936
Name: null
Funciton: 3-oxoacyl-acyl carrier protein reductase
Locus tag: LEUM_0937
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: LEUM_0938
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Xanthine/uracil permease
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligse II
Acyl-CoA reductase (LuxC)
3-oxoacyl-acyl carrier protein reductase
thiW
Substrate-specific component ThiW of predicted thiazole ECF transporter
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)

Position: -176
Score: 63
Sequence: TAAATAACTAGGGGC...
Locus tag: LEUM_0981
Name: null
Funciton: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase
Locus tag: LEUM_0982
Name: null
Funciton: hypothetical protein
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase
hypothetical protein

Position: -218
Score: 64.8
Sequence: ATTAACATACTAGGG...
Locus tag: LEUM_1455
Name: null
Funciton: Nucleoside 2-deoxyribosyltransferase
Locus tag: LEUM_1454
Name: null
Funciton: Thymidylate synthase
Locus tag: LEUM_1453
Name: null
Funciton: SAM-dependent methyltransferase
Nucleoside 2-deoxyribosyltransferase
Thymidylate synthase
SAM-dependent methyltransferase
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD