Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Lactobacillus casei ATCC 334

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Lactobacillaceae
Under regulation:
- Genes 9
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -141
Score: 61.4
Sequence: AACCTTCACAAAGGG...
Locus tag: LSEI_1757
Name: thiT
Funciton: Core component YuaJ of predicted thiamin ECF transporter
thiT
Core component YuaJ of predicted thiamin ECF transporter

Position: -245
Score: 68.2
Sequence: AGAAACATTTGGGGT...
Locus tag: LSEI_0294
Name: ykoE
Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LSEI_0295
Name: ykoD
Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LSEI_0296
Name: ykoC
Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LSEI_0297
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: LSEI_0298
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: LSEI_0299
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LSEI_0300
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: LSEI_0301
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
ykoE
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoD
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoC
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
tenA
Thiaminase II (EC 3.5.99.2)
thiW
Substrate-specific component ThiW of predicted thiazole ECF transporter
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD