Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulon of TPP in Lactobacillus reuteri JCM 1112

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Lactobacillaceae
Under regulation:
- Genes 7
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -156
Score: 71.9
Sequence: GAATAAATCTGGGGT...
Locus tag: LAR_1550
Name: ykoE
Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LAR_1551
Name: ykoD
Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: LAR_1552
Name: ykoC
Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoD
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoC
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine

Position: -182
Score: 59.3
Sequence: TTGCATAAACGGGGA...
Locus tag: LAR_1494
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
cytX
Predicted hydroxymethylpyrimidine transporter CytX

Position: -162
Score: 54.3
Sequence: TATTGCATTAGGGGT...
Locus tag: LAR_0968
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: LAR_0969
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: LAR_0970
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiM
Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiD
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiE
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD