Regulon of TPP in Oenococcus oeni PSU-1
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Lactobacillaceae |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -151
Score: 67.3 Sequence: ATACTTCTATCTGGG...
Locus tag: OEOE_0174
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OEOE_0173
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OEOE_0172
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|||
|
ykoE
|
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
||
|
ykoD
|
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
||
|
ykoC
|
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
||
|
Position: -251
Score: 65 Sequence: ACATCAAAATCTGGG...
Locus tag: OEOE_1491
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OEOE_1490
Name: null Funciton: hypothetical protein
Locus tag: OEOE_1489
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OEOE_1488
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
|||
|
ykoE
|
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
||
|
hypothetical protein
|
|||
|
ykoD
|
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
||
|
ykoC
|
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |