Regulon of LexA in Herpetosiphon aurantiacus ATCC 23779
| Regulator type: | Transcription factor |
| TF locus tag: | Haur_0151 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Chloroflexia |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Chloroflexi
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -82
Score: 4.5 Sequence: TAGCACAGATGTTCAA
Locus tag: Haur_4078
Name: mutS Funciton: DNA mismatch repair protein MutS |
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mutS
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DNA mismatch repair protein MutS
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Position: -92
Score: 4 Sequence: ATGAACAAATGTTCGA
Locus tag: Haur_0069
Name: polA Funciton: DNA polymerase I (EC 2.7.7.7) |
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polA
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DNA polymerase I (EC 2.7.7.7)
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Position: -35
Score: 4.3 Sequence: TAGCAAATTTGTACGC
Locus tag: Haur_3179
Name: sbcC Funciton: Exonuclease SbcC |
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sbcC
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Exonuclease SbcC
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Position: -91
Score: 4.7 Sequence: ACGAACAAGTGTGCTA
Locus tag: Haur_4194
Name: recA Funciton: Recombinase A
Locus tag: Haur_4193
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -8
Score: 4.7 Sequence: TAGAATATATGTTCTA
Locus tag: Haur_4111
Name: Haur_4111 Funciton: Hypothetical protein
Locus tag: Haur_4110
Name: ssb Funciton: Single-stranded DNA-binding protein |
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Haur_4111
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Hypothetical protein
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ssb
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Single-stranded DNA-binding protein
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Position: -76
Score: 4.3 Sequence: TAGCTCATTTATGCTA
Locus tag: Haur_2999
Name: mutL Funciton: DNA mismatch repair protein MutL |
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mutL
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DNA mismatch repair protein MutL
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Position: -166
Score: 4.9 Sequence: TCGAAAATTTGTGCTA
Locus tag: Haur_4373
Name: Cagg_3684 Funciton: Conserved hypothetical protein
Locus tag: Haur_4372
Name: gyrB Funciton: DNA gyrase subunit B (EC 5.99.1.3) |
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Cagg_3684
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Conserved hypothetical protein
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gyrB
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DNA gyrase subunit B (EC 5.99.1.3)
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Position: -37
Score: 4 Sequence: GCGACCGTCTGTGCTA
Locus tag: Haur_2295
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -73
Score: 4.4 Sequence: TCGACCGTGTGTGCTA
Locus tag: Haur_4844
Name: ftsK Funciton: Cell division protein FtsK |
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ftsK
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Cell division protein FtsK
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Position: -58
Score: 4 Sequence: CAGAATAGGTGTGCTA
Locus tag: Haur_3186
Name: parB Funciton: Chromosome partitioning protein ParB |
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parB
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Chromosome partitioning protein ParB
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |