Regulon of Rex in Chloroflexus aggregans DSM 9485
| Regulator type: | Transcription factor |
| TF locus tag: | Cagg_0157 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Chloroflexia |
| Statistics of regulated genes: | |
| - Genes | 30 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - Rex
- By taxonomy - Chloroflexi
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -55
Score: 5.2 Sequence: TTGTGATATACTTCTCAT
Locus tag: Cagg_1631
Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: Cagg_1630
Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: Cagg_1629
Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: Cagg_1628
Name: nuoD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: Cagg_1627
Name: nuoI Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: Cagg_1626
Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: Cagg_1625
Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: Cagg_1624
Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: Cagg_1623
Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: Cagg_1622
Name: nuoM1 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Cagg_1621
Name: nuoM2 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
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nuoA
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NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
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nuoB
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NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
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nuoC
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NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
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nuoD
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NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
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nuoI
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NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
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nuoH
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NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
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nuoJ
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NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
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nuoK
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NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
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nuoL
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NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
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nuoM1
|
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
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nuoM2
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NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
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Position: -56
Score: 5.2 Sequence: CTGTGCTGTATATCACAA
Locus tag: Cagg_2469
Name: fpr Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2) |
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fpr
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Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
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Position: -295
Score: 4.9 Sequence: ATGTGAGGTATGTCACAA
Locus tag: Cagg_0775
Name: nuoM3 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
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nuoM3
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NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
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Position: -33
Score: 5.3 Sequence: TTGTGAACAATTTCACCA
Locus tag: Cagg_0500
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) |
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ndh
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NADH dehydrogenase (EC 1.6.99.3)
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Position: -56
Score: 5.3 Sequence: TTGTTATATCTATCACAA
Locus tag: Cagg_3394
Name: acs Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1) |
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acs
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Acetyl-coenzyme A synthetase (EC 6.2.1.1)
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Position: -105
Score: 4.3 Sequence: TTGTGAAAGACTGAACAA
Locus tag: Cagg_0991
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: Cagg_0990
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: Cagg_0989
Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: Cagg_0988
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Cagg_0987
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Cagg_0986
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Cagg_0985
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Cagg_0984
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
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atpB
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ATP synthase A chain (EC 3.6.3.14)
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atpE
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ATP synthase C chain (EC 3.6.3.14)
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atpF
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ATP synthase B chain (EC 3.6.3.14)
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atpH
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ATP synthase delta chain (EC 3.6.3.14)
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atpA
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ATP synthase alpha chain (EC 3.6.3.14)
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atpG
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ATP synthase gamma chain (EC 3.6.3.14)
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atpD
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ATP synthase beta chain (EC 3.6.3.14)
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atpC
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ATP synthase epsilon chain (EC 3.6.3.14)
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Position: -28
Score: 5 Sequence: TCGTGATGTTTGTCACGA
Locus tag: Cagg_2669
Name: Cagg_2669 Funciton: Cytochrome c family protein
Locus tag: Cagg_2670
Name: Cagg_2670 Funciton: hypothetical protein |
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Cagg_2669
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Cytochrome c family protein
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Cagg_2670
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hypothetical protein
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Position: -145
Score: 4.5 Sequence: GTGACACATATTTCACAA
Position: -56
Score: 4.7 Sequence: AAGTGAATAATATCACTA
Locus tag: Cagg_2026
Name: Cagg_2669 Funciton: Cytochrome c family protein
Locus tag: Cagg_2025
Name: Cagg_2670 Funciton: hypothetical protein |
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Cagg_2669
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Cytochrome c family protein
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Cagg_2670
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hypothetical protein
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Position: -68
Score: 5.1 Sequence: ATGTGGTATATTTCACAT
Locus tag: Cagg_1949
Name: Cagg_1949 Funciton: GCN5-related N-acetyltransferase |
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Cagg_1949
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GCN5-related N-acetyltransferase
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Position: -125
Score: 5.4 Sequence: TTGTGGCGAATATCACAA
Locus tag: Cagg_0899
Name: hepT Funciton: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30) |
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hepT
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Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
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Position: -47
Score: 4.7 Sequence: TTGTGCTACACTTCACAT
Locus tag: Cagg_0157
Name: rex Funciton: Redox-sensitive transcriptional regulator Rex |
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rex
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Redox-sensitive transcriptional regulator Rex
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |