Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog MhpR - Chloroflexia

Properties
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor
Biological process: Utilization of aromatic compounds
Effector:
Phylum: Chloroflexi
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 12 2
Chloroflexus sp. Y-400-fl 13 2
Roseiflexus castenholzii DSM 13941 11 1
Roseiflexus sp. RS-1 11 1
Herpetosiphon aurantiacus ATCC 23779
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Cagg_2029
*
Chloroflexus aggregans DSM 9485

Site:
position = -146
score = 5.75499
sequence = AATTCGGTATAACCGAACG

Gene: Cagg_2029: Enoyl-CoA hydratase (EC 4.2.1.17)
*
Chloroflexus sp. Y-400-fl

Site:
position = -110
score = 5.57886
sequence = AATTCGACATAGTCGAACG

Gene: Chy400_1468: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0914: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Roseiflexus sp. RS-1

Gene: RoseRS_4259: Enoyl-CoA hydratase (EC 4.2.1.17)
 
Herpetosiphon aurantiacus ATCC 23779
Enoyl-CoA hydratase (EC 4.2.1.17)
 
CRON 2.
hpaB
*
Chloroflexus aggregans DSM 9485

Site:
position = -135
score = 5.75499
sequence = CGTTCGGTTATACCGAATT

Gene: Cagg_2030: 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
*
Chloroflexus sp. Y-400-fl

Site:
position = -138
score = 5.57886
sequence = CGTTCGACTATGTCGAATT

Gene: Chy400_1469: 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -222
score = 5.75499
sequence = CGTTCGGCTATACCGAATA

Gene: Rcas_2414: 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
*
Roseiflexus sp. RS-1

Site:
position = -229
score = 5.75499
sequence = CGTTCGACTATACCGAACA

Gene: RoseRS_2569: 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
 
Herpetosiphon aurantiacus ATCC 23779
4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.13.3)
pheB
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2031: Catechol 2,3-dioxygenase (EC 1.13.11.2)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1470: Catechol 2,3-dioxygenase (EC 1.13.11.2)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2413: Catechol 2,3-dioxygenase (EC 1.13.11.2)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2570: Catechol 2,3-dioxygenase (EC 1.13.11.2)
 
Herpetosiphon aurantiacus ATCC 23779
Catechol 2,3-dioxygenase (EC 1.13.11.2)
mhpR
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2032: Predicted transcriptional regulator of aromatic compound utilization pathway, IclR family
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1471: Predicted transcriptional regulator of aromatic compound utilization pathway, IclR family
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2412: Predicted transcriptional regulator of aromatic compound utilization pathway, IclR family
 
Roseiflexus sp. RS-1

Gene: RoseRS_2571: Predicted transcriptional regulator of aromatic compound utilization pathway, IclR family
 
Herpetosiphon aurantiacus ATCC 23779
Predicted transcriptional regulator of aromatic compound utilization pathway, IclR family
mhpF
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2033: Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1472: Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2411: Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
 
Roseiflexus sp. RS-1

Gene: RoseRS_2572: Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
 
Herpetosiphon aurantiacus ATCC 23779
Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol
leuA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2034: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1473: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2410: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2573: 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
 
Herpetosiphon aurantiacus ATCC 23779
4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
COG1853
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2035: flavin reductase domain protein FMN-binding
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1474: flavin reductase domain protein FMN-binding
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2409: flavin reductase domain protein FMN-binding
 
Roseiflexus sp. RS-1

Gene: RoseRS_2574: flavin reductase domain protein FMN-binding
 
Herpetosiphon aurantiacus ATCC 23779
flavin reductase domain protein FMN-binding
Chy400_1475
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1475: alpha/beta hydrolase fold protein
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779
alpha/beta hydrolase fold protein
pptA
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2036: 4-oxalocrotonate tautomerase (EC 5.3.2.-)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1476: 4-oxalocrotonate tautomerase (EC 5.3.2.-)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2408: 4-oxalocrotonate tautomerase (EC 5.3.2.-)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2575: 4-oxalocrotonate tautomerase (EC 5.3.2.-)
 
Herpetosiphon aurantiacus ATCC 23779
4-oxalocrotonate tautomerase (EC 5.3.2.-)
mhpD
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2037: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1477: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2407: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2576: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Herpetosiphon aurantiacus ATCC 23779
2-keto-4-pentenoate hydratase (EC 4.2.1.-)
dmpC
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2038: 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1478: 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2406: 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2577: 2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85)
 
Herpetosiphon aurantiacus ATCC 23779
2-hydroxymuconic semialdehyde dehydrogenase (EC 1.2.1.85)
mhpD2
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2039: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1479: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2405: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2578: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
 
Herpetosiphon aurantiacus ATCC 23779
2-keto-4-pentenoate hydratase (EC 4.2.1.-)
Cagg_2040
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_2040: hypothetical protein
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_1480: hypothetical protein
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2404: hypothetical protein
 
Roseiflexus sp. RS-1

Gene: RoseRS_2579: hypothetical protein
 
Herpetosiphon aurantiacus ATCC 23779
hypothetical protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulatory Sites [ FASTA format ] DOWNLOAD