Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog NanR - Staphylococcaceae

Properties
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Sialic acid utilization; N-acetylglucosamine utilization
Effector: N-acetylmannosamine-6-phosphate
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 18 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Macrococcus caseolyticus JCSC5402
Staphylococcus aureus subsp. aureus N315 5 4
Staphylococcus capitis SK14
Staphylococcus carnosus subsp. carnosus TM300 6 4
Staphylococcus epidermidis ATCC 12228
Staphylococcus haemolyticus JCSC1435 7 5
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 8 5
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nanK
 
Macrococcus caseolyticus JCSC5402
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -42
score = 6.12542
sequence = ATGAAAATGTTTTTCAA

Gene: SA0305: N-acetylmannosamine kinase (EC 2.7.1.60)
 
Staphylococcus capitis SK14
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -86
score = 6.28652
sequence = ATGAAAATAATTTTCAA

Gene: Sca_2390: N-acetylmannosamine kinase (EC 2.7.1.60)
 
Staphylococcus epidermidis ATCC 12228
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -84
score = 6.25065
sequence = ATGAAAATATTTTTCAA

Gene: SH0281: N-acetylmannosamine kinase (EC 2.7.1.60)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -90
score = 6.25065
sequence = ATGAAAATATTTTTCAA

Gene: SSP0374: N-acetylmannosamine kinase (EC 2.7.1.60)
N-acetylmannosamine kinase (EC 2.7.1.60)
 
CRON 2.
nanR
 
Macrococcus caseolyticus JCSC5402
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -53
score = 6.25065
sequence = TTGAAAATATTTTTCAT

Gene: SA0306: Sialic acid utilization regulator NanR, RpiR family
 
Staphylococcus capitis SK14
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -58
score = 6.25065
sequence = TTGAAAAAAATTTTCAT

Gene: Sca_2391: Sialic acid utilization regulator NanR, RpiR family
 
Staphylococcus epidermidis ATCC 12228
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -57
score = 6.21478
sequence = TTGAAAAATATTTTCAA

Gene: SH0280: Sialic acid utilization regulator NanR, RpiR family
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -58
score = 6.16129
sequence = ATGAAAAACATTTTCAT

Gene: SSP0373: Sialic acid utilization regulator NanR, RpiR family
Sialic acid utilization regulator NanR, RpiR family
 
CRON 3.
nagE
 
Macrococcus caseolyticus JCSC5402
 
Staphylococcus aureus subsp. aureus N315
 
Staphylococcus capitis SK14
 
Staphylococcus carnosus subsp. carnosus TM300
 
Staphylococcus epidermidis ATCC 12228
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -124
score = 6.12542
sequence = TTGAAAATGTTTTTCAT

Gene: SH0358: N-acetylglucosamine specific PTS, EIIABC component
*2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP0234: N-acetylglucosamine specific PTS, EIIABC component

Site:
position = -85
score = 5.82456
sequence = ATGAAAATATTTTTCGT

Gene: SSP0233: N-acetylglucosamine specific PTS, EIIABC component
N-acetylglucosamine specific PTS, EIIABC component
nagB
 
Macrococcus caseolyticus JCSC5402
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0527: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Staphylococcus capitis SK14

Gene: STACA0001_0462: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 2
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0227: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)

Gene: Sca_2393: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0340: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 
Staphylococcus haemolyticus JCSC1435

Gene: SH0278: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
 2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP0235: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)

Gene: SSP2149: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
nanE
 
Macrococcus caseolyticus JCSC5402
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -103
score = 6.25065
sequence = ATGAAAAATATTTTCAA

Gene: SA0307: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
 
Staphylococcus capitis SK14
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -124
score = 6.25065
sequence = ATGAAAATTTTTTTCAA

Gene: Sca_2392: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
 
Staphylococcus epidermidis ATCC 12228
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -132
score = 6.21478
sequence = TTGAAAATATTTTTCAA

Gene: SH0279: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -125
score = 6.16129
sequence = ATGAAAATGTTTTTCAT

Gene: SSP0372: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
 
CRON 4.
nanA
 
Macrococcus caseolyticus JCSC5402
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -132
score = 6.12542
sequence = TTGAAAAACATTTTCAT

Gene: SA0304: N-acetylneuraminate lyase (EC 4.1.3.3)
 
Staphylococcus capitis SK14
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -176
score = 6.28652
sequence = TTGAAAATTATTTTCAT

Gene: Sca_2389: N-acetylneuraminate lyase (EC 4.1.3.3)
 
Staphylococcus epidermidis ATCC 12228
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -175
score = 6.25065
sequence = TTGAAAAATATTTTCAT

Gene: SH0282: N-acetylneuraminate lyase (EC 4.1.3.3)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -250
score = 6.25065
sequence = TTGAAAAATATTTTCAT

Gene: SSP0375: N-acetylneuraminate lyase (EC 4.1.3.3)
N-acetylneuraminate lyase (EC 4.1.3.3)
nanT
 
Macrococcus caseolyticus JCSC5402
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0303: N-Acetylneuraminic acid permease
 
Staphylococcus capitis SK14
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_2388: N-Acetylneuraminic acid permease
 
Staphylococcus epidermidis ATCC 12228
 
Staphylococcus haemolyticus JCSC1435

Gene: SH0283: N-Acetylneuraminic acid permease
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP0376: N-Acetylneuraminic acid permease
N-Acetylneuraminic acid permease
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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