Regulog LSEI_0081 - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Transport |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - TetR
- By pathway - Transport
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | 2 | 2 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | 2 | 2 |
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | 2 | 2 |
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| LSEI_0081 |
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Lactobacillus casei ATCC 334 Site: position = -119 score = 5.43164 sequence = GACACATGTGTGAC Gene: LSEI_0081: Predicted transcriptional regulator, TetR family |
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Lactobacillus rhamnosus GG Site: position = -118 score = 5.43164 sequence = GACACATGTGTGAC Gene: LGG_00105: Predicted transcriptional regulator, TetR family |
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Oenococcus oeni PSU-1 Site: position = -141 score = 5.049 sequence = GTAACAAATGTTTC Gene: OEOE_0758: Predicted transcriptional regulator, TetR family |
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Predicted transcriptional regulator, TetR family |
| CRON 2. | ||||||||||||||||
| LSEI_0080 |
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Lactobacillus casei ATCC 334 Site: position = -53 score = 5.43164 sequence = GTCACACATGTGTC Gene: LSEI_0080: Predicted permease, MSF family |
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Lactobacillus rhamnosus GG Site: position = -53 score = 5.43164 sequence = GTCACACATGTGTC Gene: LGG_00104: Predicted permease, MSF family |
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Oenococcus oeni PSU-1 Site: position = -34 score = 5.049 sequence = GAAACATTTGTTAC Site: position = -53 score = 3.94478 sequence = GTAACAAATGTATA Gene: OEOE_0759: Predicted permease, MSF family |
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Predicted permease, MSF family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |