Regulog LBA1638 - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Transport |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - TetR
- By pathway - Transport
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | 2 | 1 |
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | 2 | 1 |
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | 2 | 1 |
| Lactobacillus johnsonii NCC 533 | 2 | 1 |
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | ||
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| LBA1638 |
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Lactobacillus acidophilus NCFM Site: position = -66 score = 6.16472 sequence = TGTAGATTGTATTCTTCA Gene: LBA1638: Predicted transcriptional regulator, TetR family |
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Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -89 score = 5.86031 sequence = TGTAGATTGAAACCTTCA Gene: LBUL_1758: Predicted transcriptional regulator, TetR family |
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Lactobacillus helveticus DPC 4571 Site: position = -65 score = 6.35566 sequence = TGTAGATTGTAATCTTCA Gene: lhv_1742: Predicted transcriptional regulator, TetR family |
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Lactobacillus johnsonii NCC 533 Site: position = -65 score = 5.93137 sequence = TGTAGATTGTTTTCTACA Gene: LJ0666: Predicted transcriptional regulator, TetR family |
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Predicted transcriptional regulator, TetR family |
| ydgH |
Gene: LBA1637: Predicted drug exporter protein, RND superfamily |
Gene: LVIS_0758: Predicted drug exporter protein, RND superfamily |
Gene: LSEI_0060: Predicted drug exporter protein, RND superfamily |
Gene: LBUL_1757: Predicted drug exporter protein, RND superfamily |
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Gene: lhv_1741: Predicted drug exporter protein, RND superfamily |
Gene: LJ0667: Predicted drug exporter protein, RND superfamily |
Gene: lp_0295: Predicted drug exporter protein, RND superfamily |
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Gene: LGG_00068: Predicted drug exporter protein, RND superfamily |
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Gene: PEPE_0328: Predicted drug exporter protein, RND superfamily |
Predicted drug exporter protein, RND superfamily |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |