Regulog HxlR - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Hexulose metabolism |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - LacI
- By pathway - Hexulose metabolism
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | 7 | 1 |
| Lactobacillus casei ATCC 334 | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | ||
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | 6 | 1 |
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| LVIS_0438 |
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Lactobacillus brevis ATCC 367 Site: position = -76 score = 5.89269 sequence = TAGGAAAACGTTTACCAT Site: position = -178 score = 6.06749 sequence = TAGGTTAACGTTTTCCCA Gene: LVIS_0438: Conserved hypothetical protein |
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Gene: LEUM_0499: Conserved hypothetical protein |
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Oenococcus oeni PSU-1 Site: position = -125 score = 6.09632 sequence = TGGGTAAACGATTTCCTA Site: position = -70 score = 6.18798 sequence = TAGGTAAGCGTTTACCCA Gene: OEOE_0127: Conserved hypothetical protein |
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Conserved hypothetical protein |
| usp |
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Gene: LVIS_0439: Predicted sugar phosphate isomerase/epimerase |
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Gene: LEUM_0500: Predicted sugar phosphate isomerase/epimerase |
Gene: OEOE_0128: Predicted sugar phosphate isomerase/epimerase |
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Predicted sugar phosphate isomerase/epimerase |
| LVIS_0440 |
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Gene: LVIS_0440: Predicted permease |
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Gene: LEUM_0501: Predicted permease |
Gene: OEOE_0129: Predicted permease |
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Predicted permease |
| kdgK |
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Gene: LVIS_0441: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) |
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Gene: LEUM_0502: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) |
Gene: OEOE_0130: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) |
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2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) |
| hxlA |
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Gene: LVIS_0442: 3-hexulose-6-phosphate synthase |
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Gene: OEOE_0131: 3-hexulose-6-phosphate synthase |
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3-hexulose-6-phosphate synthase |
| hxlB |
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Gene: LVIS_0443: 6-phospho-3-hexuloisomerase |
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Gene: OEOE_0132: 6-phospho-3-hexuloisomerase |
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6-phospho-3-hexuloisomerase |
| hxlR |
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Gene: LVIS_0444: Predicted hexulose metabolism transcriptional regulator HxlR, LacI family |
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Gene: OEOE_0125: Predicted hexulose metabolism transcriptional regulator HxlR, LacI family |
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Predicted hexulose metabolism transcriptional regulator HxlR, LacI family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |