Regulog LSEI_0368 - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sugar utilization |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - LacI
- By pathway - Sugar utilization
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | 3 | 2 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | 5 | 2 |
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| LSEI_0368 |
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Lactobacillus casei ATCC 334 Site: position = -71 score = 6.4612 sequence = TTGTGTAAACGTTTTCGCAT Site: position = -169 score = 6.72384 sequence = TTGCGGTAACGTTTACGCAA Gene: LSEI_0368 : Predicted sugar utilization transcriptional regulator, LacI family |
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Lactobacillus rhamnosus GG Site: position = -82 score = 6.4612 sequence = TTGTGTAAACGTTTTCGCAC Site: position = -180 score = 6.72384 sequence = TTGCGGTAACGTTTACGCAA Gene: LGG_00419: Predicted sugar utilization transcriptional regulator, LacI family |
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Predicted sugar utilization transcriptional regulator, LacI family |
| CRON 2. | ||||||||||||||||
| tal |
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Gene: LVIS_0764: Transaldolase (EC 2.2.1.2) |
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Lactobacillus casei ATCC 334 Site: position = -44 score = 6.72384 sequence = TTGCGTAAACGTTACCGCAA Site: position = -142 score = 6.4612 sequence = ATGCGAAAACGTTTACACAA Gene: LSEI_0367: Transaldolase (EC 2.2.1.2) |
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Gene: LAF_1722: Transaldolase (EC 2.2.1.2) |
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Lactobacillus rhamnosus GG Site: position = -141 score = 6.4612 sequence = GTGCGAAAACGTTTACACAA Site: position = -43 score = 6.72384 sequence = TTGCGTAAACGTTACCGCAA Gene: LGG_00418: Transaldolase (EC 2.2.1.2) |
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Transaldolase (EC 2.2.1.2) |
| LSEI_0366 |
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Gene: LSEI_0366: Predicted PTS, EIICD component (EC 2.7.1.69), similar to mannose PTS |
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Gene: LGG_00417: Predicted PTS, EIICD component (EC 2.7.1.69), similar to mannose PTS |
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Predicted PTS, EIICD component (EC 2.7.1.69), similar to mannose PTS |
| LGG_00416 |
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Gene: LGG_00416: Predicted PTS, EIIA component |
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Predicted PTS, EIIA component |
| LGG_00415 |
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Gene: LGG_00415: Predicted PTS, EIIB component |
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Predicted PTS, EIIB component |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |