Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Val) - Chloroflexia

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Val-tRNA
Phylum: Chloroflexi
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485
Chloroflexus sp. Y-400-fl
Roseiflexus castenholzii DSM 13941
Roseiflexus sp. RS-1
Herpetosiphon aurantiacus ATCC 23779 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Haur_3008
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -274
score = 116.94
sequence = ACAAACGACGTTGAA...

Gene: Haur_2856: putative membrane protein.
putative membrane protein.
valS
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_0010: Valyl-tRNA synthetase (EC 6.1.1.9)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2861: Valyl-tRNA synthetase (EC 6.1.1.9)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_0367: Valyl-tRNA synthetase (EC 6.1.1.9)
 
Roseiflexus sp. RS-1

Gene: RoseRS_0129: Valyl-tRNA synthetase (EC 6.1.1.9)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_2855: Valyl-tRNA synthetase (EC 6.1.1.9)
Valyl-tRNA synthetase (EC 6.1.1.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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